Factsheet for TraesCS3B01G434500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	98.66	98.66
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	97.7	97.7
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	95.39	95.39
KXG33863	Sorghum	golgi, vacuole	83.49	83.49
Os01t0891000-01	Rice	extracellular	83.49	82.7
Zm00001d012176_P001	Maize	extracellular	83.3	82.51
GSMUA_Achr11P...	Banana	cytosol	37.43	72.49
TraesCS1B01G270100.1	Wheat	golgi, vacuole	73.13	72.43
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	28.6	70.62
CDY39278	Canola	cytosol	55.09	67.85
Solyc11g008810.1.1	Tomato	extracellular, nucleus	62.76	65.79
PGSC0003DMT400041850	Potato	extracellular	64.11	62.9
AT1G65590.1	Thale cress	vacuole	62.96	61.31
Bra004121.1-P	Field mustard	vacuole	62.0	60.49
CDY07456	Canola	vacuole	62.0	60.49
VIT_00s0220g00180.t01	Wine grape	vacuole	29.17	56.93
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	11.52	50.42
TraesCS1B01G058700.1	Wheat	golgi, vacuole	48.75	46.52
TraesCS2B01G221500.1	Wheat	golgi, vacuole	32.82	29.33
TraesCS4B01G243000.1	Wheat	plastid	33.4	29.1

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PFscan:PS51257	PANTHER:PTHR22600	PANTHER:PTHR22600:SF18
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3B01G434500	EnsemblPlants:TraesCS3B01G434500.1	TIGR:cd06562
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:672865239..672870230

Molecular Weight (calculated)

58355.3 Da

IEP (calculated)

5.838

GRAVY (calculated)

-0.191

Length

521 amino acids

Sequence
(BLAST)

001: MALALRLLLA LLAIGSCIAA DHVDLWPMPK SVSHGTQRLY VSNNATMSMA GSKYSDGKAI LKDAFQRMLD LMKLNHNADG ANPSSSLLTG VNIVVLSTQD
101: ELGFEVDESY NLTVPTIGEP LHAQIEAQTV FGALHALQTF SQLCHFEFTS RLIGLNSAPW MISDAPRFPY RGLLIDTSRH YLPLATIKGV IDAMTYSKLN
201: VLHWHIVDEQ SFPIEIPSYP KLWNGSYSYS ERYTMPDAID IVRYAEKRGV NVLAEIDVPG HARSWGVGYP ELWPSDSCRE PLDVSNNFTF KVIDGILSDF
301: SKVFKFKFAH LGGDEVNTSC WTETPHIKEW LNNNHMNVSD AYRYFVLRAQ KIAISHGYEV INWEETFNNF GDKLDRKTVV HNWLGGDVAP KVVAAGLRCI
401: VSNQDKWYLD HLDATWEGFY LNEPLKGINN TEQQRLVIGG EVCMWGEQID ASDIEQTIWP RAAAAAERLW SPLEQIAEDT RSATSRLSRF RCLLNQRGVA
501: AAPLAGDGRT APYEPGPCVR Q

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [extracellular,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.