Factsheet for Zm00001d003675_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004978_P001
Zm00001d006398_P001
Zm00001d008293_P001
Zm00001d021515_P001
Zm00001d027827_P001
Zm00001d032616_P001
Zm00001d032991_P001
Zm00001d034768_P005
Zm00001d035095_P001
Zm00001d035598_P001
Zm00001d040343_P003
Zm00001d044917_P001
Zm00001d048131_P001
Zm00001d049665_P001
Zm00001d053306_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	Zm00001d035095_P001	AT1G12310.1	21798944
AT2G23420.1	Zm00001d049665_P001	AT1G12310.1	21798944
AT2G23420.1	Zm00001d008293_P001	AT1G14640.1	21798944
AT2G23420.1	Zm00001d040343_P003	AT1G14640.1	21798944
AT2G23420.1	Zm00001d044917_P001	AT1G49590.1	21798944
AT2G23420.1	Zm00001d004978_P001	AT1G50450.1	21798944
AT2G23420.1	Zm00001d027827_P001	AT1G55270.1	21798944
AT2G23420.1	Zm00001d032991_P001	AT1G55270.1	21798944
AT2G23420.1	Zm00001d006398_P001	AT3G16250.1	21798944
AT2G23420.1	Zm00001d021515_P001	AT3G16250.1	21798944
AT2G23420.1	Zm00001d034768_P005	AT3G26420.1	21798944
AT2G23420.1	Zm00001d035598_P001	AT3G55260.1	21798944
AT2G23420.1	Zm00001d032616_P001	AT3G62250.1	21798944
AT2G23420.1	Zm00001d053306_P001	AT4G32750.1	21798944
AT2G23420.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28456	Soybean	extracellular	43.05	50.79
KXG26318	Sorghum	cytosol, plastid	88.79	34.74
Os04t0429800-01	Rice	plasma membrane, plastid	83.86	33.21
TraesCS2D01G301100.1	Wheat	golgi	82.51	32.51
TraesCS2B01G318300.2	Wheat	cytosol, peroxisome, plastid	82.51	32.51
TraesCS2A01G302400.1	Wheat	cytosol, peroxisome, plastid	82.06	32.33
HORVU2Hr1G075010.5	Barley	peroxisome	82.06	32.22
Zm00001d025412_P001	Maize	plastid	87.0	30.12
Zm00001d034777_P005	Maize	cytosol	71.3	28.55
PGSC0003DMT400010254	Potato	cytosol	70.4	28.14
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	70.4	28.14
VIT_07s0031g00460.t01	Wine grape	cytosol	68.61	27.27
AT2G23420.1	Thale cress	cytosol	67.26	26.93
KRH57934	Soybean	cytosol, nucleus	66.82	26.75
CDY46076	Canola	cytosol	65.92	26.44
Bra039198.1-P	Field mustard	cytosol	65.92	26.44
Solyc03g044430.2.1	Tomato	cytosol	66.82	26.33
KRH77015	Soybean	cytosol	65.47	26.16
CDY29537	Canola	cytosol	65.92	26.16
AT4G36940.1	Thale cress	cytosol	65.47	26.12
CDY66512	Canola	cytosol	65.02	26.08
CDY63965	Canola	cytosol	56.5	24.23
Bra017808.1-P	Field mustard	cytosol	54.71	23.19
KRH04597	Soybean	cytosol	30.49	16.04
KRH63322	Soybean	extracellular	2.24	6.02
Zm00001d003674_P001	Maize	extracellular	1.79	1.48

Protein Annotations

KEGG:00760+6.3.4.21	Gene3D:3.20.140.10	Gene3D:3.20.20.70	MapMan:35.1	UniProt:A0A1D6EAS3	InterPro:Aldolase_TIM
GO:GO:0003674	GO:GO:0003824	GO:GO:0004514	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009435	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	InterPro:IPR013785
InterPro:Nic_PRibTrfase-Fam	InterPro:Nicotinate_pribotase_like_C	ProteinID:ONM17461.1	PANTHER:PTHR11098	PANTHER:PTHR11098:SF17	SUPFAM:SSF51690
SUPFAM:SSF54675	UniParc:UPI000221BCCB	EnsemblPlantsGene:Zm00001d003675	EnsemblPlants:Zm00001d003675_P001	EnsemblPlants:Zm00001d003675_T001	SEG:seg

Description

Nicotinate phosphoribosyltransferase 2

Coordinates

chr2:-:53664164..53668648

Molecular Weight (calculated)

24160.0 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.233

Length

223 amino acids

Sequence
(BLAST)

001: MAAPATSGPP ASANGSLAGV AAAVGAPTNP MATAMLTDQY QFSMAYAYWK AGKHADRAVF DLYFRKNPFG GEFTVFAGLE ECIKFMANFK FTEHDISFLQ
101: SVMPTCAGAF FDYLGEVDCS DVEVYSIPEG SVVFPKVPLM RVEGPVAVVQ LLETPFVNLI NYASLVTTNA ARHRHVAGKS KVLLEFGLRR AQGPDGAISA
201: SKYCFMGGFD ATRWIIFAFI VYN

Best Arabidopsis Sequence Match ( AT2G23420.1 )
(BLAST)

001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ

Arabidopsis Description

NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.