Factsheet for Solyc03g044430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g005970.2.1
Solyc01g022740.2.1
Solyc01g056940.2.1
Solyc01g104840.2.1
Solyc01g107300.2.1
Solyc01g107310.2.1
Solyc01g108430.2.1
Solyc02g081960.2.1
Solyc03g083520.2.1
Solyc04g005690.2.1
Solyc05g054710.2.1
Solyc08g068350.2.1
Solyc08g083360.2.1
Solyc10g047130.1.1
Solyc10g049630.1.1
Solyc11g065240.1.1
Solyc11g072270.1.1
Solyc12g098940.1.1
Solyc12g099030.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	Solyc03g083520.2.1	AT1G12310.1	21798944
AT2G23420.1	Solyc11g072270.1.1	AT1G12310.1	21798944
AT2G23420.1	Solyc02g081960.2.1	AT1G14640.1	21798944
AT2G23420.1	Solyc04g005690.2.1	AT1G14640.1	21798944
AT2G23420.1	Solyc01g108430.2.1	AT1G49590.1	21798944
AT2G23420.1	Solyc11g065240.1.1	AT1G50450.1	21798944
AT2G23420.1	Solyc01g005970.2.1	AT1G55270.1	21798944
AT2G23420.1	Solyc01g022740.2.1	AT1G55270.1	21798944
AT2G23420.1	Solyc08g083360.2.1	AT3G16250.1	21798944
AT2G23420.1	Solyc01g104840.2.1	AT3G26420.1	21798944
AT2G23420.1	Solyc10g047130.1.1	AT3G26420.1	21798944
AT2G23420.1	Solyc05g054710.2.1	AT3G55260.1	21798944
AT2G23420.1	Solyc01g056940.2.1	AT3G62250.1	21798944
AT2G23420.1	Solyc12g098940.1.1	AT3G62250.1	21798944
AT2G23420.1	Solyc12g099030.1.1	AT3G62250.1	21798944
AT2G23420.1	Solyc08g068350.2.1	AT4G32750.1	21798944
AT2G23420.1	Solyc01g107300.2.1	AT4G33920.1	21798944
AT2G23420.1	Solyc01g107310.2.1	AT4G33920.1	21798944
AT2G23420.1	Solyc10g049630.1.1	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	85.34	86.56
KRH04597	Soybean	cytosol	62.72	83.73
GSMUA_Achr2P08220_001	Banana	cytosol	77.03	81.34
VIT_07s0031g00460.t01	Wine grape	cytosol	80.57	81.28
KRH57934	Soybean	cytosol, nucleus	79.15	80.43
Bra039198.1-P	Field mustard	cytosol	77.74	79.14
CDY46076	Canola	cytosol	77.74	79.14
AT4G36940.1	Thale cress	cytosol	78.09	79.07
CDY63965	Canola	cytosol	72.61	79.04
AT2G23420.1	Thale cress	cytosol	77.74	78.99
GSMUA_Achr11P...	Banana	cytosol	72.08	78.76
Bra017808.1-P	Field mustard	cytosol	72.61	78.14
CDY66512	Canola	cytosol	76.68	78.06
CDY29537	Canola	cytosol	77.21	77.76
Zm00001d034777_P005	Maize	cytosol	75.8	77.02
Zm00001d003674_P001	Maize	extracellular	36.57	76.67
Os03t0837300-02	Rice	plasma membrane	75.62	76.43
Os04t0429800-01	Rice	plasma membrane, plastid	75.8	76.2
OQU90665	Sorghum	peroxisome	75.62	75.62
KRH77015	Soybean	cytosol	74.2	75.27
TraesCS2D01G301100.1	Wheat	golgi	75.09	75.09
TraesCS2A01G302400.1	Wheat	cytosol, peroxisome, plastid	74.91	74.91
TraesCS2B01G318300.2	Wheat	cytosol, peroxisome, plastid	74.91	74.91
TraesCS4A01G354500.1	Wheat	peroxisome	76.15	74.7
TraesCS5B01G517900.3	Wheat	peroxisome	75.97	74.52
TraesCS5D01G517600.1	Wheat	peroxisome	75.97	74.52
KXG26318	Sorghum	cytosol, plastid	74.73	74.21
KRH63322	Soybean	extracellular	10.25	69.88
Zm00001d003675_P001	Maize	plastid	26.33	66.82
Zm00001d025412_P001	Maize	plastid	74.38	65.37
KRH28456	Soybean	extracellular	20.32	60.85
HORVU2Hr1G074990.1	Barley	plastid	4.06	21.9

Protein Annotations

KEGG:00760+6.3.4.21	MapMan:15.3.3.1.6	Gene3D:3.20.140.10	Gene3D:3.20.20.70	MapMan:7.9.2.2	InterPro:Aldolase_TIM
GO:GO:0003674	GO:GO:0003824	GO:GO:0004514	GO:GO:0004516	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009435	GO:GO:0009987	GO:GO:0016740	GO:GO:0019358
InterPro:IPR013785	UniProt:K4BG62	InterPro:Nic_PRibTrfase-Fam	InterPro:Nic_PRibTrfase_pncB	InterPro:Nicotinate_pribotase_like_C	PIRSF:PIRSF000484
PANTHER:PTHR11098	PANTHER:PTHR11098:SF17	SUPFAM:SSF51690	SUPFAM:SSF54675	EnsemblPlantsGene:Solyc03g044430.2	EnsemblPlants:Solyc03g044430.2.1
TIGRFAMs:TIGR01513	UniParc:UPI0002768344	:	:	:	:

Description

No Description!

Coordinates

chr3:+:9218517..9228644

Molecular Weight (calculated)

63241.6 Da

IEP (calculated)

8.071

GRAVY (calculated)

-0.111

Length

566 amino acids

Sequence
(BLAST)

001: MASAVVANGK KKLEQRGPKI GVISGPTNPM VTPLLTDLYQ FTMAYAYWKA GKHNERAVFD LYFRKNPFGG EYTIFAGLEE CIKLIAHYKL TEEEIAFIRK
101: SLPPSCEDAF YNYLRGIDCS DVEIFSIPEG SVVFPKVPLM RIEGSIAVVQ LLETALVNLI NYASLVTTNA ARHRFVAGKS KLLLEFGLRR AQGPDGGISA
201: SKYCYMGGFD ATSNVAAGKL FGIPLRGTHS HAFVSSFMSL DEITERSLKH LDSPKVCKDF VCVVKTWLTK LKRSRLLGGI FSETNQSELA AFALYGLAFP
301: GGFLALVDTY DVMRSGVPNF CAVALALNDL GYRAVGIRLD SGDLAYQSCE ARKFFQTIEE EFGVPGFGKM NITASNDLNE ETLDALKKQG HEVDSFGIGT
401: HLVTCYAQPA LGVVFKLVEI NNQPRIKLSE DVTKVSIPCK KRCFRLYGKE GYPLVDIMTG ENEPPPKVGE RILCRHPFSE SKRAYVVPQR VEELLKCFWP
501: GSSEKIREDL PPLKEIRERC IEQLEQMRPD HMRRLNPTPY KVSVSAKLYD FIHFLWLNEA PVGELQ

Best Arabidopsis Sequence Match ( AT4G36940.1 )
(BLAST)

001: MEKKENGLDG KQSGRVINGP TNPMVTPLLN DLYQFTMAYA YWKAGKQSER SVFDLYFRKN PFGGEYTIFA GLEECIKFLA NFNLTDEEID FVRDSLPGCE
101: EAFCDYLRGL DCSDIEVYAI SEGSVVFPKV PLLRIEGPVA VVQLLETPFL NLINYASLVA TNAARHRFVA GKSKLLLEFG ARRAQGPDGA ISASKYCYLG
201: GFDATSNVAA GKLFGIPLRG THSHAFVSSF MSLDEIVDKV LRSSDGKSTC KDFICLVQTC LTKIQNSSSL QGIFSETNQS ELAAFISYAL AFPNSFLALV
301: DTYDVMKSGI PNFCAVALAL NELGYKAVGI RLDSGDLAYL STEVRKFFCA IERDLKVPDF GKMIVTASND LNEETVDALN KQGHEVDAFG IGTNLVTCYA
401: QAALGCVFKL VEINNQPRIK LSEDVTKVSI PCKKRTYRLF GKEGYPLVDI MTGENEPPPK VGERLLCRHP FNESKRAYVV PQRVEELLKC YWRGNADEAR
501: EELEPLKELR NRCIKQLENM RPDHMRRLNP TPYKVSVSAK LYDFIHFLWL NEAPVGELH

Arabidopsis Description

NAPRT1NAPRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5W0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.