Factsheet for Solyc01g107300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g110190.2.1
Solyc10g054080.1.1
Solyc11g044880.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	Solyc01g110190.2.1	AT4G39050.1	21798944
AT4G33920.1	Solyc10g054080.1.1	AT4G39050.1	21798944
AT4G33920.1	Solyc11g044880.1.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066175	Potato	cytosol	92.14	56.27
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	81.22	48.95
GSMUA_Achr6P11170_001	Banana	cytosol	73.36	44.68
GSMUA_Achr3P02220_001	Banana	mitochondrion	70.31	42.82
CDY28332	Canola	mitochondrion	70.74	42.19
Bra034592.1-P	Field mustard	mitochondrion	70.74	42.08
CDY51944	Canola	mitochondrion	70.74	42.08
CDX72438	Canola	mitochondrion	68.56	41.98
AT4G33920.1	Thale cress	mitochondrion	69.43	41.84
Bra036972.1-P	Field mustard	mitochondrion	67.69	41.44
Solyc02g092750.2.1	Tomato	cytosol	65.94	41.26
GSMUA_Achr2P21550_001	Banana	mitochondrion	69.43	41.19
GSMUA_Achr4P14220_001	Banana	mitochondrion	66.81	41.02
CDY49385	Canola	mitochondrion	66.81	40.91
HORVU5Hr1G018930.2	Barley	mitochondrion	66.38	39.69
Os12t0580900-01	Rice	mitochondrion	66.81	39.03
TraesCS5D01G085200.1	Wheat	mitochondrion	65.07	38.9
TraesCS5A01G072500.1	Wheat	mitochondrion	65.07	38.9
TraesCS5B01G078500.1	Wheat	mitochondrion	64.19	38.38
EER95306	Sorghum	mitochondrion	61.14	35.71
Zm00001d048131_P001	Maize	cytosol	60.7	35.55
Os03t0207400-01	Rice	mitochondrion	58.95	34.44
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	57.64	33.93
TraesCS4A01G050000.1	Wheat	plastid	58.95	31.54
TraesCS4B01G254700.1	Wheat	plastid	58.52	31.46
Solyc10g084410.1.1	Tomato	mitochondrion	51.09	31.12
Solyc10g055650.1.1	Tomato	cytosol	45.41	30.68
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	51.97	30.67
Solyc09g007080.2.1	Tomato	cytosol	49.78	30.16
Solyc02g083420.2.1	Tomato	mitochondrion	51.09	30.0
HORVU4Hr1G069380.3	Barley	peroxisome	30.57	29.29
Solyc03g033340.2.1	Tomato	mitochondrion	49.34	28.46
Solyc06g065920.2.1	Tomato	nucleus	45.85	28.07
Solyc05g055980.2.1	Tomato	cytosol	32.75	23.89
Solyc10g078810.1.1	Tomato	cytosol	43.67	22.83
Solyc10g078820.1.1	Tomato	mitochondrion	45.85	22.83
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	17.9	12.93
Solyc09g010780.2.1	Tomato	cytosol	30.57	11.24
Solyc06g076100.2.1	Tomato	nucleus	34.06	11.02
Solyc12g099600.1.1	Tomato	plasma membrane	27.07	10.78
Solyc10g086490.1.1	Tomato	cytosol	27.95	10.74
Solyc01g107310.2.1	Tomato	mitochondrion	7.42	9.19
Solyc08g077150.2.1	Tomato	nucleus	30.13	8.67
Solyc08g007000.2.1	Tomato	nucleus	29.26	8.58
Solyc10g078800.1.1	Tomato	mitochondrion	44.1	7.7

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4B2U7	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF362
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc01g107300.2	EnsemblPlants:Solyc01g107300.2.1	UniParc:UPI0002767C7C	:

Description

No Description!

Coordinates

chr1:+:94889294..94891967

Molecular Weight (calculated)

25449.4 Da

IEP (calculated)

6.417

GRAVY (calculated)

-0.157

Length

229 amino acids

Sequence
(BLAST)

001: MMMRSCYRPL ERCFERINGD GLLWHMDLKP HASGDFSIAV VQANSSLEDQ SQVFTSPSAT YVGVYDGHGG PEASRFVNRH LFSYLHKFSK EQGGLSSDVI
101: KSAFHATEED FIQLVKRSLP AMPKIASVGS CCLVGAISEG ELYVANLGDS RAVLGRRGFD AEKNSVVAER LSTDHNVSCE EVRKEVESLH PDDQDIVVHI
201: RGVWRIKGII QVGMMFYLNS PVRFIIAEP

Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.