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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX72718
CDX90305
CDY12116
CDY20311
CDY22394
CDY46148

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G33920.1 CDY20311 AT2G24400.1 21798944
AT4G33920.1 CDY46148 AT2G24400.1 21798944
AT4G33920.1 CDX72718 AT4G39050.1 21798944
AT4G33920.1 CDX90305 AT4G39050.1 21798944
AT4G33920.1 CDY12116 AT4G39050.1 21798944
AT4G33920.1 CDY22394 AT4G39050.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51944 Canola mitochondrion 100.0 99.74
Bra034592.1-P Field mustard mitochondrion 99.74 99.48
AT4G33920.1 Thale cress mitochondrion 91.15 92.11
CDX72438 Canola mitochondrion 86.98 89.3
CDY49385 Canola mitochondrion 86.46 88.77
VIT_03s0091g00470.t01 Wine grape mitochondrion 71.35 71.92
KRH35699 Soybean mitochondrion 70.31 71.43
KRG91074 Soybean cytosol, mitochondrion 69.01 71.05
Solyc01g107300.2.1 Tomato cytosol 42.19 70.74
PGSC0003DMT400066175 Potato cytosol 67.97 69.6
PGSC0003DMT400013942 Potato cytosol, mitochondrion 66.41 68.73
GSMUA_Achr6P11170_001 Banana cytosol 66.67 68.09
VIT_07s0129g00520.t01 Wine grape cytosol 67.45 67.45
Solyc10g049630.1.1 Tomato mitochondrion, nucleus 65.89 66.58
VIT_18s0001g09390.t01 Wine grape mitochondrion 65.36 66.4
KRH28403 Soybean cytosol 64.06 65.6
KRH77072 Soybean cytosol 64.06 65.25
GSMUA_Achr2P21550_001 Banana mitochondrion 65.1 64.77
GSMUA_Achr3P02220_001 Banana mitochondrion 62.76 64.1
Os12t0580900-01 Rice mitochondrion 64.32 63.01
GSMUA_Achr4P14220_001 Banana mitochondrion 59.9 61.66
HORVU5Hr1G018930.2 Barley mitochondrion 61.2 61.36
TraesCS5D01G085200.1 Wheat mitochondrion 60.94 61.1
TraesCS5B01G078500.1 Wheat mitochondrion 60.68 60.84
TraesCS5A01G072500.1 Wheat mitochondrion 60.16 60.31
Solyc01g107310.2.1 Tomato mitochondrion 28.91 60.0
Os03t0207400-01 Rice mitochondrion 57.55 56.38
Zm00001d048131_P001 Maize cytosol 57.29 56.27
EER95306 Sorghum mitochondrion 57.29 56.12
TraesCS4D01G254500.1 Wheat mitochondrion, nucleus, plastid, vacuole 54.95 54.24
CDX73725 Canola vacuole 50.78 51.72
CDY16313 Canola extracellular 50.26 51.19
CDY33283 Canola plastid 50.0 50.26
CDY54807 Canola nucleus, peroxisome, plastid 51.04 50.26
CDY08420 Canola cytosol, mitochondrion, plastid 49.48 50.13
CDX90277 Canola cytosol, mitochondrion, nucleus 49.48 50.0
TraesCS4A01G050000.1 Wheat plastid 55.73 50.0
CDY42159 Canola cytosol 49.22 49.87
CDX75902 Canola plastid 48.96 49.87
TraesCS4B01G254700.1 Wheat plastid 55.21 49.77
CDY12086 Canola cytosol, mitochondrion, nucleus 49.22 49.74
HORVU4Hr1G069380.3 Barley peroxisome 30.73 49.37
CDY52665 Canola cytosol 48.7 49.34
CDY14069 Canola cytosol, mitochondrion 49.74 48.85
CDY39026 Canola cytosol, plastid, vacuole 47.92 48.68
CDY34992 Canola cytosol, plastid, vacuole 47.92 48.68
CDX76124 Canola mitochondrion 47.4 48.66
CDY05001 Canola cytosol, mitochondrion 49.48 48.59
CDX70348 Canola cytosol, mitochondrion 45.83 48.48
CDY70696 Canola extracellular, peroxisome 40.89 48.46
CDY50535 Canola cytosol, mitochondrion, plastid 48.44 48.06
CDY55405 Canola cytosol, nucleus, plastid 46.09 47.97
CDY11224 Canola cytosol 44.53 47.9
CDY02904 Canola mitochondrion 46.61 47.86
CDY04862 Canola cytosol, mitochondrion, plastid 44.79 47.78
CDY10428 Canola mitochondrion 45.05 47.66
CDX80837 Canola cytosol, mitochondrion 44.53 46.98
CDY51441 Canola mitochondrion 46.88 46.51
CDX73413 Canola mitochondrion 46.88 46.51
CDX70071 Canola cytosol, mitochondrion 46.35 46.48
CDX98953 Canola cytosol, mitochondrion 46.09 46.21
CDY40818 Canola mitochondrion 13.54 41.27
CDY29015 Canola cytosol 38.28 40.83
CDX78002 Canola vacuole 50.78 39.08
CDY51276 Canola mitochondrion 8.07 37.35
CDY40354 Canola cytosol 19.27 30.71
CDY71703 Canola cytosol 12.24 23.5
CDY43107 Canola cytosol, nucleus, peroxisome 25.0 19.59
CDX92079 Canola cytosol, nucleus, peroxisome 25.0 19.35
CDY57256 Canola cytosol, nucleus, peroxisome 27.08 17.81
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 26.3 17.38
CDY71973 Canola cytosol, nucleus, peroxisome 23.7 17.14
CDX95140 Canola cytosol, mitochondrion, nucleus 27.34 16.94
CDY71801 Canola cytosol 23.96 16.88
CDY06718 Canola mitochondrion, plastid 27.34 16.64
CDY62569 Canola nucleus 26.04 16.29
CDY41610 Canola nucleus 25.0 16.16
CDY44706 Canola nucleus 24.74 16.05
CDY68192 Canola mitochondrion, nucleus, plastid 23.44 15.93
CDY59038 Canola plastid 23.44 15.71
CDX73980 Canola nucleus 26.56 15.32
CDY07928 Canola nucleus 26.04 15.11
CDY31682 Canola nucleus, plastid 24.22 13.98
CDX84217 Canola nucleus, plastid 23.7 13.73
CDX80059 Canola cytosol, nucleus, peroxisome 28.91 13.06
CDY41568 Canola cytosol, nucleus, peroxisome 28.91 13.04
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:A0A078GT71UniProt:A0A078GT71
EnsemblPlants:CDY28332ProteinID:CDY28332ProteinID:CDY28332.1GO:GO:0003674GO:GO:0003824GO:GO:0004721
GO:GO:0004722GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0043169GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00040108001
InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF362SMART:SM00332
SUPFAM:SSF81606UniParc:UPI000192DF05SEG:seg:::
Description
BnaC03g66270DBnaC03g66270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT71]
Coordinates
chrLK032217:+:501835..503720
Molecular Weight (calculated)
42607.0 Da
IEP (calculated)
9.190
GRAVY (calculated)
-0.336
Length
384 amino acids
Sequence
(BLAST)
001: MLRALARPLE RCLGSRASGD GLLWQSELKP HAGGDYSIAV VQANSSLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYIQKFAK EHGGLSADVI
101: KKAFKETEED FCGMVKRSLP MKPQMATVGS CCLFGAISNG TLYVANLGDS RAVLGSVVAG DDSNSSNKGA AAERLSTDHN VAVEEVRKEV KELNPDDSQI
201: VMYIRGVWRI KGIIQVSRSI GDVYLKKPEF YRDPIFQQHG NHIPLRRPAM TAEPSIIVRK LKPQDLFLIF ASDGLWEHLS DEAAVEIVLK HPRTGIARKL
301: VRAALEEAAR KREMRYGDIK KIAKGVRRHF HDDISVVVVY LDQQKTTSSS NDRLIQKGGI TAPPDIYSLR SDEAEQRRLL NVLY
Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)
001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY
Arabidopsis Description
Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.