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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16313 Canola extracellular 91.51 91.51
AT3G51370.1 Thale cress cytosol, extracellular 90.98 90.5
CDY33283 Canola plastid 91.51 90.31
GSMUA_Achr4P04870_001 Banana cytosol 69.76 76.9
Solyc10g055650.1.1 Tomato cytosol 67.64 75.22
GSMUA_Achr3P00610_001 Banana cytosol 68.7 74.43
KRH69725 Soybean mitochondrion 77.19 73.86
Bra036813.1-P Field mustard vacuole 97.61 73.75
CDX78002 Canola vacuole 97.61 73.75
PGSC0003DMT400046486 Potato mitochondrion 75.6 73.45
Solyc01g111730.2.1 Tomato cytosol, mitochondrion, plastid 75.6 73.45
PGSC0003DMT400068706 Potato mitochondrion 74.01 72.85
KRH07984 Soybean mitochondrion 76.13 72.84
GSMUA_Achr3P26820_001 Banana mitochondrion 75.6 72.33
Zm00001d027570_P001 Maize cytosol, peroxisome, plastid 68.44 72.27
PGSC0003DMT400009248 Potato mitochondrion 74.54 72.05
KRG90665 Soybean mitochondrion 75.86 72.04
KRH36089 Soybean cytosol 75.86 72.04
PGSC0003DMT400058098 Potato mitochondrion 75.86 72.04
Solyc03g033340.2.1 Tomato mitochondrion 75.86 72.04
EER90402 Sorghum mitochondrion 74.01 71.72
Solyc02g083420.2.1 Tomato mitochondrion 74.01 71.54
Os06t0717800-01 Rice mitochondrion 74.27 71.43
Zm00001d014797_P001 Maize mitochondrion 74.54 71.32
HORVU7Hr1G117970.1 Barley mitochondrion 73.21 70.41
TraesCS7B01G455500.1 Wheat mitochondrion 72.94 70.15
CDY29015 Canola cytosol 66.84 70.0
TraesCS7A01G537000.1 Wheat mitochondrion 72.68 69.9
GSMUA_Achr1P26350_001 Banana mitochondrion, peroxisome, plastid 73.47 69.77
GSMUA_Achr5P11520_001 Banana mitochondrion 73.21 69.7
TraesCS7D01G524700.1 Wheat mitochondrion 72.15 69.39
CDX90277 Canola cytosol, mitochondrion, nucleus 69.76 69.21
CDY12086 Canola cytosol, mitochondrion, nucleus 69.76 69.21
VIT_03s0038g02650.t01 Wine grape mitochondrion 72.15 68.51
Zm00001d027571_P003 Maize cytosol 72.41 68.42
Zm00001d027572_P004 Maize cytosol, peroxisome, plastid 72.41 68.42
GSMUA_Achr8P13120_001 Banana cytosol 70.56 67.86
EER95550 Sorghum mitochondrion, peroxisome, plastid 71.35 67.42
Os03t0137200-01 Rice mitochondrion 70.82 66.92
HORVU4Hr1G080570.1 Barley mitochondrion 70.56 66.67
TraesCS4D01G331100.1 Wheat mitochondrion 70.56 66.67
TraesCS5A01G505300.1 Wheat mitochondrion 70.03 66.17
Os10t0544900-01 Rice plastid 68.97 66.16
GSMUA_Achr7P03910_001 Banana cytosol, nucleus, peroxisome 67.11 66.06
GSMUA_Achr9P24110_001 Banana cytosol 69.76 65.75
TraesCS4B01G335500.1 Wheat mitochondrion 69.76 65.75
Zm00001d048359_P004 Maize mitochondrion, peroxisome, plastid 72.41 65.47
EER94559 Sorghum cytosol 67.9 65.14
TraesCS1A01G205300.2 Wheat cytosol, peroxisome, plastid 67.64 65.05
VIT_00s0434g00020.t01 Wine grape cytosol 70.29 64.95
TraesCS1D01G208600.1 Wheat cytosol, peroxisome, plastid 67.37 64.8
CDY54807 Canola nucleus, peroxisome, plastid 66.84 64.62
TraesCS1B01G218900.1 Wheat cytosol, peroxisome, plastid 67.11 64.54
Zm00001d047385_P004 Maize cytosol, mitochondrion, plastid 67.37 63.82
HORVU1Hr1G052770.6 Barley nucleus, peroxisome, plastid 67.37 63.66
CDY42159 Canola cytosol 62.6 62.27
CDX73413 Canola mitochondrion 63.13 61.5
CDY51441 Canola mitochondrion 62.86 61.24
CDY70696 Canola extracellular, peroxisome 52.52 61.11
CDY08420 Canola cytosol, mitochondrion, plastid 61.27 60.95
CDX76124 Canola mitochondrion 60.21 60.7
CDY50535 Canola cytosol, mitochondrion, plastid 61.8 60.21
CDY52665 Canola cytosol 60.21 59.89
CDY02904 Canola mitochondrion 59.42 59.89
CDY55405 Canola cytosol, nucleus, plastid 58.09 59.35
CDY04862 Canola cytosol, mitochondrion, plastid 56.5 59.17
CDY11224 Canola cytosol 55.7 58.82
CDY10428 Canola mitochondrion 56.23 58.4
CDX70348 Canola cytosol, mitochondrion 55.97 58.13
CDX80837 Canola cytosol, mitochondrion 54.11 56.04
CDX75902 Canola plastid 53.85 53.85
CDY14069 Canola cytosol, mitochondrion 54.91 52.94
CDY05001 Canola cytosol, mitochondrion 54.64 52.69
CDY34992 Canola cytosol, plastid, vacuole 52.79 52.65
CDY39026 Canola cytosol, plastid, vacuole 52.79 52.65
Zm00001d036395_P008 Maize mitochondrion 73.47 52.07
CDY49385 Canola mitochondrion 50.93 51.34
CDX70071 Canola cytosol, mitochondrion 51.72 50.91
CDX72438 Canola mitochondrion 50.4 50.8
CDY28332 Canola mitochondrion 51.72 50.78
CDX98953 Canola cytosol, mitochondrion 51.46 50.65
CDY51944 Canola mitochondrion 51.72 50.65
CDY40818 Canola mitochondrion 16.71 50.0
CDY51276 Canola mitochondrion 9.28 42.17
CDY40354 Canola cytosol 21.49 33.61
CDY71703 Canola cytosol 14.06 26.5
CDY57256 Canola cytosol, nucleus, peroxisome 32.89 21.23
CDY43107 Canola cytosol, nucleus, peroxisome 27.59 21.22
CDY71973 Canola cytosol, nucleus, peroxisome 29.44 20.9
CDX92079 Canola cytosol, nucleus, peroxisome 27.32 20.77
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 31.3 20.31
CDX95140 Canola cytosol, mitochondrion, nucleus 32.89 20.0
CDY71801 Canola cytosol 28.91 20.0
CDY06718 Canola mitochondrion, plastid 33.16 19.81
CDY68192 Canola mitochondrion, nucleus, plastid 28.38 18.94
CDY62569 Canola nucleus 30.77 18.89
CDY59038 Canola plastid 28.65 18.85
CDY44706 Canola nucleus 29.44 18.75
CDY41610 Canola nucleus 29.44 18.69
CDX73980 Canola nucleus 31.3 17.72
CDY07928 Canola nucleus 31.03 17.67
CDY31682 Canola nucleus, plastid 30.77 17.44
CDX84217 Canola nucleus, plastid 30.5 17.35
CDX80059 Canola cytosol, nucleus, peroxisome 33.42 14.82
CDY41568 Canola cytosol, nucleus, peroxisome 33.42 14.81
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:A0A078CAB0EnsemblPlants:CDX73725
ProteinID:CDX73725ProteinID:CDX73725.1GO:GO:0003674GO:GO:0003824GO:GO:0004722GO:GO:0005488
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538GO:GO:0043169EnsemblPlantsGene:GSBRNA2T00109329001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481
InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746
PANTHER:PTHR13832PANTHER:PTHR13832:SF237SMART:SM00332SUPFAM:SSF81606SignalP:SignalP-noTMUniParc:UPI0004EE13FB
Description
BnaC08g22780D
Coordinates
chrLK031799:-:2367371..2369584
Molecular Weight (calculated)
41873.6 Da
IEP (calculated)
8.584
GRAVY (calculated)
-0.223
Length
377 amino acids
Sequence
(BLAST)
001: MLATLMKLLS ACLWPSSGRS VDSSGKQDGL LWYKDSGQHL LGDFSMAVVQ ANNLLEDQSQ VESGPLSTLD SGPYGTFIGI YDGHGGPETS RFVNDHLFQH
101: LKRFAAEQGS MSMDVIRKAY EATEEGFLGV VTKQWPVKPL IAAVGSCCLV GVICGGMLYI ANVGDSRAVL GRAMKATGEA IALQLSAEHN VSIESVRQEM
201: HSLHPDDSHI VVLKHNVWRV KGLIQVSRSI GDMYLKKAEF NREPLYTKYR LREPIKRPIL SGEPSITEHE LQPQDQFLIF ASDGLWEQLS NQEAVDIVQN
301: HPRNGIARRL VKTAMQAAAK KREMRYSDLM KIERGVRRHF HDDITVVVIY LDTNVVSSAK GPSLSIRGRG MTFPKKL
Best Arabidopsis Sequence Match ( AT3G51370.3 )
(BLAST)
001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI
Arabidopsis Description
Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.