Factsheet for PGSC0003DMT400068706

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g055650.1.1	Tomato	cytosol	87.21	98.53
PGSC0003DMT400046486	Potato	mitochondrion	87.47	86.34
PGSC0003DMT400009248	Potato	mitochondrion	77.55	76.15
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	69.97	75.07
GSMUA_Achr3P00610_001	Banana	cytosol	68.15	75.0
GSMUA_Achr4P04870_001	Banana	cytosol	66.84	74.85
CDY16313	Canola	extracellular	73.37	74.54
AT3G51370.1	Thale cress	cytosol, extracellular	73.63	74.41
PGSC0003DMT400058098	Potato	mitochondrion	76.76	74.06
CDX73725	Canola	vacuole	72.85	74.01
GSMUA_Achr5P11520_001	Banana	mitochondrion	76.24	73.74
Bra038895.1-P	Field mustard	plastid	73.37	73.56
CDY33283	Canola	plastid	73.37	73.56
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	76.24	73.55
AT5G66080.1	Thale cress	plastid	73.89	73.51
EER90402	Sorghum	mitochondrion	74.41	73.26
TraesCS7B01G455500.1	Wheat	mitochondrion	74.41	72.7
Os06t0717800-01	Rice	mitochondrion	74.15	72.45
HORVU7Hr1G117970.1	Barley	mitochondrion	74.15	72.45
TraesCS7A01G537000.1	Wheat	mitochondrion	73.89	72.19
TraesCS7D01G524700.1	Wheat	mitochondrion	73.89	72.19
Bra010741.1-P	Field mustard	plastid	71.54	72.11
Zm00001d014797_P001	Maize	mitochondrion	73.89	71.83
CDY12086	Canola	cytosol, mitochondrion, nucleus	70.76	71.32
CDX90277	Canola	cytosol, mitochondrion, nucleus	70.76	71.32
GSMUA_Achr3P26820_001	Banana	mitochondrion	73.11	71.07
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	73.89	70.93
AT4G38520.1	Thale cress	mitochondrion	73.89	70.75
EER94559	Sorghum	cytosol	72.06	70.23
HORVU4Hr1G080570.1	Barley	mitochondrion	73.11	70.18
TraesCS5A01G505300.1	Wheat	mitochondrion	72.85	69.92
TraesCS4D01G331100.1	Wheat	mitochondrion	72.85	69.92
Zm00001d027571_P003	Maize	cytosol	72.85	69.92
GSMUA_Achr8P13120_001	Banana	cytosol	71.54	69.9
Os03t0137200-01	Rice	mitochondrion	72.58	69.67
EER95550	Sorghum	mitochondrion, peroxisome, plastid	72.58	69.67
TraesCS4B01G335500.1	Wheat	mitochondrion	72.32	69.25
Os10t0544900-01	Rice	plastid	71.02	69.21
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	70.76	69.13
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	70.76	69.13
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	70.76	69.13
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	71.54	69.02
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	71.28	68.59
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	74.15	68.11
CDY54807	Canola	nucleus, peroxisome, plastid	68.67	67.44
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	70.23	67.42
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	66.84	66.84
PGSC0003DMT400028715	Potato	cytosol	64.75	65.96
CDY70696	Canola	extracellular, peroxisome	55.09	65.12
GSMUA_Achr9P24110_001	Banana	cytosol	67.62	64.75
PGSC0003DMT400005115	Potato	cytosol	62.66	63.49
PGSC0003DMT400060005	Potato	cytosol	62.92	62.76
CDY29015	Canola	cytosol	57.18	60.83
PGSC0003DMT400067223	Potato	mitochondrion	55.61	56.95
Bra036813.1-P	Field mustard	vacuole	72.06	55.31
CDX78002	Canola	vacuole	72.06	55.31
Zm00001d036395_P008	Maize	mitochondrion	73.37	52.82
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	50.39	52.02
PGSC0003DMT400066175	Potato	cytosol	50.91	52.0
PGSC0003DMT400064207	Potato	cytosol	49.09	50.54
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	47.26	46.89
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	45.95	45.13
PGSC0003DMT400029765	Potato	mitochondrion	45.17	42.3
PGSC0003DMT400029770	Potato	mitochondrion	41.51	37.32
PGSC0003DMT400029776	Potato	cytosol	17.23	35.87
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	28.46	20.92
PGSC0003DMT400011807	Potato	nucleus	25.59	19.76
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	30.29	19.33
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	29.24	17.75
PGSC0003DMT400078173	Potato	nucleus	32.9	17.7
PGSC0003DMT400045127	Potato	nucleus	31.33	15.04
PGSC0003DMT400052881	Potato	nucleus	30.55	14.98
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	9.4	10.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:M1CJD9	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400026717	PGSC:PGSC0003DMG400026717
EnsemblPlants:PGSC0003DMT400068706	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF237	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295D771

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400026717]

Coordinates

chr10:+:47454694..47459341

Molecular Weight (calculated)

42595.8 Da

IEP (calculated)

8.589

GRAVY (calculated)

-0.295

Length

383 amino acids

Sequence
(BLAST)

001: MNFLRACFQP RANRHVHTGS DASGRQDGLL WYKDTGQHFN GEFSMAVVQA NNLLEDQSQV ESGCLGLNDS GPYGTFVGIY DGHGGPETSR FINDNLFQHL
101: KRCTSDQQTM SVEVIRKAFQ ATEEGFLSIV TRRWPTQPQI AAVGSCCLVG VICSGTLYVA NLGDSRAVLG RLVKATGEIL AIQLSAEHNA SIESVRQEMH
201: SLHPDDSQIV VLKHNVWRVK GIIQITRSIG DVYLKKSEFN REPLYAKFRL REPFQRPILS ADPAILVHPV QPQDQFIIFA SDGLWEHLSN QEAVDIVQNH
301: PRNGIAKRLV KTALQEAAKK REMRYSDLKK IDRGVRRHFH DDISVVVIFL DSDFASRASS GKVPNVSVKG GGISLPRNTL APT

Best Arabidopsis Sequence Match ( AT5G66080.1 )
(BLAST)

001: MLSLFFNFLT SCLWPSSSTT SHTYSDSKGK QDGLLWYKDS AHHLFGDFSM AVVQANNLLE DQSQVESGPL TTLSSSGPYG TFVGVYDGHG GPETSRFVND
101: HLFHHLKRFA AEQDSMSVDV IRKAYEATEE GFLGVVAKQW AVKPHIAAVG SCCLIGVVCD GKLYVANVGD SRAVLGKVIK ATGEVNALQL SAEHNVSIES
201: VRQEMHSLHP DDSHIVVLKH NVWRVKGIIQ VSRSIGDVYL KKSEFNKEPL YTKYRLREPM KRPILSWEPS ITVHDLQPDD QFLIFASDGL WEQLSNQEAV
301: EIVQNHPRNG IARRLVKAAL QEAAKKREMR YSDLNKIERG VRRHFHDDIT VVVLFLDTNL LSRASSLKTP SVSIRGGGIT LPKKL

Arabidopsis Description

Probable protein phosphatase 2C 79 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKX4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.