Factsheet for PGSC0003DMT400064207

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g092750.2.1	Tomato	cytosol	95.16	96.72
VIT_07s0129g00520.t01	Wine grape	cytosol	70.97	68.75
GSMUA_Achr6P11170_001	Banana	cytosol	67.47	66.76
PGSC0003DMT400066175	Potato	cytosol	66.94	66.4
KRH28403	Soybean	cytosol	66.94	66.4
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	65.59	65.77
VIT_18s0001g09390.t01	Wine grape	mitochondrion	66.67	65.61
KRH77072	Soybean	cytosol	65.59	64.72
GSMUA_Achr4P14220_001	Banana	mitochondrion	64.25	64.08
GSMUA_Achr3P02220_001	Banana	mitochondrion	63.98	63.3
GSMUA_Achr2P21550_001	Banana	mitochondrion	65.32	62.95
Os12t0580900-01	Rice	mitochondrion	64.78	61.48
HORVU5Hr1G018930.2	Barley	mitochondrion	62.37	60.57
TraesCS5A01G072500.1	Wheat	mitochondrion	61.56	59.79
TraesCS5D01G085200.1	Wheat	mitochondrion	61.29	59.53
TraesCS5B01G078500.1	Wheat	mitochondrion	60.75	59.01
Zm00001d048131_P001	Maize	cytosol	56.45	53.71
Os03t0207400-01	Rice	mitochondrion	56.45	53.57
EER95306	Sorghum	mitochondrion	56.45	53.57
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	55.11	52.7
PGSC0003DMT400068706	Potato	mitochondrion	50.54	49.09
PGSC0003DMT400028715	Potato	cytosol	49.19	48.67
TraesCS4B01G254700.1	Wheat	plastid	55.38	48.36
TraesCS4A01G050000.1	Wheat	plastid	55.38	48.13
PGSC0003DMT400046486	Potato	mitochondrion	49.46	47.42
PGSC0003DMT400009248	Potato	mitochondrion	49.46	47.18
PGSC0003DMT400005115	Potato	cytosol	47.85	47.09
HORVU4Hr1G069380.3	Barley	peroxisome	30.11	46.86
PGSC0003DMT400060005	Potato	cytosol	48.12	46.61
PGSC0003DMT400058098	Potato	mitochondrion	49.19	46.1
PGSC0003DMT400067223	Potato	mitochondrion	44.62	44.38
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	44.35	42.75
PGSC0003DMT400029765	Potato	mitochondrion	43.01	39.12
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	40.59	38.72
PGSC0003DMT400029770	Potato	mitochondrion	38.17	33.33
PGSC0003DMT400029776	Potato	cytosol	14.25	28.8
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	26.61	19.0
PGSC0003DMT400011807	Potato	nucleus	25.27	18.95
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	25.54	15.83
PGSC0003DMT400078173	Potato	nucleus	28.76	15.03
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	25.0	14.74
PGSC0003DMT400045127	Potato	nucleus	28.49	13.28
PGSC0003DMT400052881	Potato	nucleus	27.42	13.06
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	6.72	7.35

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102597588	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1CBX4	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400024944	PGSC:PGSC0003DMG400024944	EnsemblPlants:PGSC0003DMT400064207	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF362	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002957A74	RefSeq:XP_006339829.1	SEG:seg	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400024944]

Coordinates

chr2:+:43133288..43136871

Molecular Weight (calculated)

40960.7 Da

IEP (calculated)

5.303

GRAVY (calculated)

-0.257

Length

372 amino acids

Sequence
(BLAST)

001: MLSSCFGSCF GGGDGDDLLW HMDLKPHATG DYSVAVVQAN SLLEDQGQVF TTPGATYVGV YDGHGGPQAS RFINNNLFPQ LQKLALEEGG LSEDVIRKAF
101: DAIEEGFLRL VKQSWLDKPQ IASAGSCCLF GAISKDELYV ANLGDSRAVL GRRAETGQTG DSAVVVAERL SIDHNVGVEE VRKEVEALHP DDSHVVVYTR
201: GVWRIKGIIQ VSRSIGDVYL KKPEFNRDPM FIQYGYPIPL KRAVMSAEPS ILIRKIRPED LFLIFASDGL WDQLSDDEAV DIVLKNPRSG IAKRLVRAAL
301: EGAAEKKEMR YEDIKRLEKG ERRHVHDDIT VIVIYLDRPG SSTNSGMNIV KGTNVPLDIY SLNSGHQGEN TS

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.