Factsheet for PGSC0003DMT400022788

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	51.19	95.0
Solyc09g010780.2.1	Tomato	cytosol	92.23	93.42
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	70.21	73.83
CDY40354	Canola	cytosol	26.47	69.29
GSMUA_Achr2P16350_001	Banana	mitochondrion	50.4	57.09
GSMUA_Achr5P29080_001	Banana	mitochondrion	51.82	56.67
CDY71703	Canola	cytosol	17.91	56.5
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	51.66	53.53
CDY62569	Canola	nucleus	49.92	51.3
PGSC0003DMT400078173	Potato	nucleus	57.84	51.26
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	46.43	51.05
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	47.07	50.94
CDY44706	Canola	nucleus	46.43	49.49
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	48.81	49.12
CDY41610	Canola	nucleus	45.96	48.82
Zm00001d034655_P001	Maize	peroxisome	47.39	48.62
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	48.97	48.43
EER90623	Sorghum	plastid	48.49	48.27
TraesCS5A01G479600.1	Wheat	plastid	48.81	48.2
HORVU5Hr1G113240.1	Barley	plastid	48.81	48.12
AT5G02400.1	Thale cress	nucleus	51.35	48.07
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	48.34	47.73
Zm00001d012962_P001	Maize	mitochondrion	47.54	47.47
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	48.81	47.38
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	44.06	46.57
Bra029766.1-P	Field mustard	nucleus	46.43	45.5
CDY07928	Canola	nucleus	47.7	45.47
CDX73980	Canola	nucleus	47.39	44.89
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	42.47	44.52
Bra001308.1-P	Field mustard	nucleus	47.86	44.15
Bra009593.1-P	Field mustard	nucleus	50.87	39.93
PGSC0003DMT400045127	Potato	nucleus	45.17	35.71
PGSC0003DMT400052881	Potato	nucleus	44.06	35.6
PGSC0003DMT400011807	Potato	nucleus	25.36	32.26
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	25.83	31.29
PGSC0003DMT400060005	Potato	cytosol	18.38	30.21
PGSC0003DMT400005115	Potato	cytosol	18.07	30.16
PGSC0003DMT400028715	Potato	cytosol	17.91	30.05
PGSC0003DMT400068706	Potato	mitochondrion	17.75	29.24
PGSC0003DMT400046486	Potato	mitochondrion	17.43	28.35
PGSC0003DMT400058098	Potato	mitochondrion	17.43	27.71
PGSC0003DMT400009248	Potato	mitochondrion	17.12	27.69
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	16.48	26.94
PGSC0003DMT400066175	Potato	cytosol	16.01	26.93
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	15.53	26.42
PGSC0003DMT400067223	Potato	mitochondrion	15.37	25.94
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	15.85	25.64
PGSC0003DMT400064207	Potato	cytosol	14.74	25.0
PGSC0003DMT400029765	Potato	mitochondrion	16.16	24.94
PGSC0003DMT400029770	Potato	mitochondrion	13.95	20.66
PGSC0003DMT400029776	Potato	cytosol	4.91	16.85

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102605350	MapMan:18.4.24.2.3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1AH81	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400008840	PGSC:PGSC0003DMG400008840	EnsemblPlants:PGSC0003DMT400022788	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000296E09A
RefSeq:XP_006341030.1	RefSeq:XP_015161459.1	SEG:seg	:	:	:

Description

Protein phosphatase 2C 23 [Source:PGSC_GENE;Acc:PGSC0003DMG400008840]

Coordinates

chr9:+:1844380..1847383

Molecular Weight (calculated)

70100.3 Da

IEP (calculated)

5.782

GRAVY (calculated)

-0.372

Length

631 amino acids

Sequence
(BLAST)

001: MGNGVRKLNH CFAGDVGEIS KRHNDLNLTD PLDEGLGHSF CYIRPDPYSK PHLFSDDSSS SSTTTTISSA TSTTTTAAFC TISGASISAN TFTPLSTAHV
101: DFSAHVDKAS AFESSQFFSS IPLQPIPRGV FHSGPIPARV SNTGLGSGPV ERGFMSGPIE RSFISGPMEN QYDHIQRYKL KSKKWGLIRS LKKVFSSSFF
201: GYKEVKFTEK NNINVSEVKF IESNINVGNV LSSENSLGDD DDEGNDSFRG QNVQWAQGKA GEDRVHVVIS EEHGWVFVGI YDGFNGPDAT DFLLSNLYSN
301: VYKELKGLLW NDKSETPKNS MSNEVVSLRN SGVSKVEHFV PNQEFDGVSG VDHSDVLKAL SEGLRKTEAS YLEIADMMVN ENPELALMGS CVMVMLLKDQ
401: DVYLLNVGDS RAVLAQNLES DLSVSKFRRI NEQSVSSIDA LYRAESDRKH NLVPAQLTMD HSTSIKEEVV RIRSEHPDDA FAIKNDRVKG SLKVTRAFGA
501: GYLKQAKWNN ALLEMFRIDY IGNSPYINCL PSLHHHTLGS RDKFLILSSD GLYQYFTNEE AVSEVETFMS IFPEGDPAQH LVEEVLFRAA KKAGLNFHEL
601: LDIPQGDRRK YHDDVSIIIL SFEGRIWKSS M

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.