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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71703 Canola cytosol 68.05 82.0
CDY62569 Canola nucleus 98.34 38.6
AT5G02400.1 Thale cress nucleus 92.95 33.23
CDY44706 Canola nucleus 78.42 31.93
CDY41610 Canola nucleus 78.42 31.82
CDY07928 Canola nucleus 84.23 30.66
GSMUA_Achr2P16350_001 Banana mitochondrion 70.12 30.34
CDX73980 Canola nucleus 83.4 30.18
GSMUA_Achr5P29080_001 Banana mitochondrion 71.37 29.81
Bra009593.1-P Field mustard nucleus 99.17 29.73
GSMUA_Achr10P... Banana mitochondrion, nucleus, plastid 72.2 28.57
CDY57256 Canola cytosol, nucleus, peroxisome 68.46 28.25
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 67.63 28.06
PGSC0003DMT400049278 Potato cytosol, nucleus, peroxisome 68.46 27.5
TraesCS5B01G492700.1 Wheat mitochondrion, plastid 71.37 27.43
Solyc10g086490.1.1 Tomato cytosol 67.63 27.35
CDX95140 Canola cytosol, mitochondrion, nucleus 70.12 27.26
Solyc09g010780.2.1 Tomato cytosol 70.12 27.13
TraesCS5D01G493200.1 Wheat mitochondrion, plastid 71.37 26.96
Zm00001d012962_P001 Maize mitochondrion 70.12 26.74
TraesCS5A01G479600.1 Wheat plastid 70.54 26.6
HORVU5Hr1G113240.1 Barley plastid 70.54 26.56
Zm00001d034655_P001 Maize peroxisome 67.63 26.5
EER90623 Sorghum plastid 69.71 26.5
CDY06718 Canola mitochondrion, plastid 69.29 26.47
PGSC0003DMT400022788 Potato cytosol, nucleus, peroxisome 69.29 26.47
Os03t0821300-01 Rice mitochondrion, nucleus, peroxisome, plastid 70.12 26.45
GSMUA_Achr9P03940_001 Banana cytosol, nucleus, peroxisome 62.66 26.31
CDY71973 Canola cytosol, nucleus, peroxisome 57.68 26.18
CDY68192 Canola mitochondrion, nucleus, plastid 61.0 26.02
CDY59038 Canola plastid 61.0 25.65
KRG99924 Soybean cytosol, mitochondrion, nucleus, plastid 63.07 25.46
GSMUA_AchrUn_... Banana mitochondrion, nucleus, peroxisome 61.41 25.39
CDY71801 Canola cytosol 57.26 25.32
CDY70696 Canola extracellular, peroxisome 33.61 25.0
KRH49093 Soybean cytosol, mitochondrion, nucleus, plastid 61.0 24.42
CDY11224 Canola cytosol 33.61 22.69
CDY10428 Canola mitochondrion 34.02 22.59
CDX70348 Canola cytosol, mitochondrion 34.02 22.59
CDY04862 Canola cytosol, mitochondrion, plastid 33.61 22.5
CDY31682 Canola nucleus, plastid 61.0 22.11
CDX84217 Canola nucleus, plastid 60.58 22.02
CDX80837 Canola cytosol, mitochondrion 33.2 21.98
CDX73725 Canola vacuole 33.61 21.49
CDY55405 Canola cytosol, nucleus, plastid 32.78 21.41
CDX76124 Canola mitochondrion 33.2 21.39
CDY02904 Canola mitochondrion 33.2 21.39
CDY52665 Canola cytosol 33.61 21.37
CDY12086 Canola cytosol, mitochondrion, nucleus 33.61 21.32
CDX90277 Canola cytosol, mitochondrion, nucleus 33.61 21.32
CDY16313 Canola extracellular 33.2 21.22
CDY43107 Canola cytosol, nucleus, peroxisome 42.74 21.02
CDY33283 Canola plastid 33.2 20.94
CDX92079 Canola cytosol, nucleus, peroxisome 42.74 20.77
CDX75902 Canola plastid 32.37 20.69
CDY50535 Canola cytosol, mitochondrion, plastid 33.2 20.67
CDY34992 Canola cytosol, plastid, vacuole 32.37 20.63
CDY39026 Canola cytosol, plastid, vacuole 32.37 20.63
CDY08420 Canola cytosol, mitochondrion, plastid 32.37 20.58
CDY42159 Canola cytosol 32.37 20.58
CDY51441 Canola mitochondrion 32.78 20.41
CDX73413 Canola mitochondrion 32.78 20.41
CDY54807 Canola nucleus, peroxisome, plastid 32.78 20.26
CDX72438 Canola mitochondrion 30.29 19.52
CDY28332 Canola mitochondrion 30.71 19.27
CDY49385 Canola mitochondrion 29.88 19.25
CDY51944 Canola mitochondrion 30.71 19.22
CDX70071 Canola cytosol, mitochondrion 29.88 18.8
CDY14069 Canola cytosol, mitochondrion 30.29 18.67
CDY05001 Canola cytosol, mitochondrion 30.29 18.67
CDY41568 Canola cytosol, nucleus, peroxisome 64.73 18.33
CDX98953 Canola cytosol, mitochondrion 29.05 18.28
CDX80059 Canola cytosol, nucleus, peroxisome 64.32 18.24
CDX78002 Canola vacuole 33.61 16.23
CDY29015 Canola cytosol 22.82 15.28
PGSC0003DMT400022786 Potato cytosol, nucleus, peroxisome 2.49 1.76
CDY40818 Canola mitochondrion 0.41 0.79
CDY51276 Canola mitochondrion 0.0 0.0
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.3Gene3D:3.60.40.10GO:A0A078HSV3UniProt:A0A078HSV3
EnsemblPlants:CDY40354ProteinID:CDY40354ProteinID:CDY40354.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00069542001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF228SMART:SM00332
SUPFAM:SSF81606UniParc:UPI0004EEB873SEG:seg:::
Description
BnaA10g27140DBnaA10g27140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSV3]
Coordinates
chrLK032468:+:234678..235761
Molecular Weight (calculated)
27681.3 Da
IEP (calculated)
5.923
GRAVY (calculated)
-0.334
Length
241 amino acids
Sequence
(BLAST)
001: MVEENPELAL MGSCVLVTLM KGEDVYVMNV GDSRAVLARK PNVRIKEVRE MFMNGAITRN SLVPLQLNKE HSTRIEEEVR RIKKEHPEDD GAIENDRVKG
101: YLKVTRAFGA GFLKQPKWND ALLEMFRIDY IGTSPYITCS PSLCHHKLTS RDKFLILSSD GLYEYFSNQE AIFEVESFIS AFPEGDPAQH LIQEVLLRAA
201: NKYGMDFHEL LEIPQGDRRR YHDDISVIVI SLEGRIWRSS M
Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)
001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV
Arabidopsis Description
PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.