Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 91.87 | 94.17 |
| CDY11224 | Canola | cytosol | 88.35 | 91.32 |
| CDY10428 | Canola | mitochondrion | 89.43 | 90.91 |
| CDX70348 | Canola | cytosol, mitochondrion | 89.16 | 90.63 |
| CDY40818 | Canola | mitochondrion | 30.89 | 90.48 |
| CDX80837 | Canola | cytosol, mitochondrion | 84.01 | 85.16 |
| AT5G02760.1 | Thale cress | cytosol, mitochondrion | 83.47 | 83.24 |
| CDY51276 | Canola | mitochondrion | 16.8 | 74.7 |
| GSMUA_Achr6P23480_001 | Banana | cytosol | 55.01 | 60.78 |
| GSMUA_Achr6P15470_001 | Banana | mitochondrion | 62.33 | 60.69 |
| CDX76124 | Canola | mitochondrion | 60.98 | 60.16 |
| CDY02904 | Canola | mitochondrion | 60.16 | 59.36 |
| GSMUA_Achr10P... | Banana | cytosol | 60.16 | 59.04 |
| CDX73725 | Canola | vacuole | 59.35 | 58.09 |
| CDY16313 | Canola | extracellular | 58.81 | 57.56 |
| CDY42159 | Canola | cytosol | 58.81 | 57.26 |
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 58.54 | 56.99 |
| CDY33283 | Canola | plastid | 58.81 | 56.81 |
| Os01t0976700-01 | Rice | mitochondrion | 57.45 | 56.38 |
| TraesCS3B01G604000.1 | Wheat | mitochondrion | 58.81 | 56.22 |
| CDX73413 | Canola | mitochondrion | 58.81 | 56.07 |
| CDY51441 | Canola | mitochondrion | 58.81 | 56.07 |
| TraesCS3A01G538500.1 | Wheat | mitochondrion | 58.54 | 55.96 |
| CDY52665 | Canola | cytosol | 57.18 | 55.67 |
| TraesCS3D01G544100.1 | Wheat | mitochondrion | 57.99 | 55.44 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 56.91 | 55.26 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 57.72 | 55.04 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 56.1 | 54.47 |
| HORVU3Hr1G117670.6 | Barley | mitochondrion | 58.27 | 54.43 |
| HORVU3Hr1G114160.1 | Barley | mitochondrion | 45.8 | 54.34 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 55.83 | 52.82 |
| CDY70696 | Canola | extracellular, peroxisome | 44.99 | 51.23 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 51.22 | 50.0 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 51.22 | 50.0 |
| CDX75902 | Canola | plastid | 50.68 | 49.6 |
| TraesCS7A01G386400.1 | Wheat | cytosol | 18.43 | 48.57 |
| CDY29015 | Canola | cytosol | 46.88 | 48.06 |
| CDY14069 | Canola | cytosol, mitochondrion | 50.14 | 47.31 |
| CDX72438 | Canola | mitochondrion | 47.7 | 47.06 |
| CDY49385 | Canola | mitochondrion | 47.7 | 47.06 |
| CDY05001 | Canola | cytosol, mitochondrion | 49.32 | 46.55 |
| CDY28332 | Canola | mitochondrion | 47.97 | 46.09 |
| CDY51944 | Canola | mitochondrion | 47.97 | 45.97 |
| CDX70071 | Canola | cytosol, mitochondrion | 46.61 | 44.91 |
| CDX98953 | Canola | cytosol, mitochondrion | 46.34 | 44.65 |
| CDX78002 | Canola | vacuole | 59.08 | 43.69 |
| HORVU2Hr1G009490.1 | Barley | mitochondrion | 17.34 | 40.51 |
| CDY40354 | Canola | cytosol | 21.41 | 32.78 |
| CDY71703 | Canola | cytosol | 14.09 | 26.0 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 27.37 | 20.61 |
| CDY57256 | Canola | cytosol, nucleus, peroxisome | 32.25 | 20.38 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 26.83 | 19.96 |
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 30.62 | 19.45 |
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 27.91 | 19.4 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 28.73 | 18.76 |
| CDY71801 | Canola | cytosol | 27.64 | 18.72 |
| CDY06718 | Canola | mitochondrion, plastid | 31.98 | 18.7 |
| CDY44706 | Canola | nucleus | 29.81 | 18.58 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 31.17 | 18.55 |
| CDY59038 | Canola | plastid | 28.73 | 18.5 |
| CDY41610 | Canola | nucleus | 29.54 | 18.35 |
| CDY62569 | Canola | nucleus | 30.08 | 18.08 |
| CDY07928 | Canola | nucleus | 31.44 | 17.52 |
| CDX73980 | Canola | nucleus | 30.89 | 17.12 |
| CDY31682 | Canola | nucleus, plastid | 30.35 | 16.84 |
| CDX84217 | Canola | nucleus, plastid | 29.81 | 16.59 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 32.52 | 14.12 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 32.52 | 14.1 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | GO:A0A078IYG4 | UniProt:A0A078IYG4 |
| EnsemblPlants:CDY55405 | ProteinID:CDY55405 | ProteinID:CDY55405.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00016805001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF367 | SMART:SM00332 | SUPFAM:SSF81606 | TMHMM:TMhelix | UniParc:UPI0004EE406D |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng28720DBnaCnng28720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYG4]
Coordinates
chrLK033400:-:3108..4656
Molecular Weight (calculated)
41182.3 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.364
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKSCWRIGT SMERSKISPT KNDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNLAVQG TFVGVYDGHG GPEASRFIAE NLFPNLKKFA
101: SEGGEVSEEV IRNAFAETEE DFLTAVKKKW RKSPQMASVG SCCLVGVICN GLVYIANAGD SRAVLGRSER GGGVRAVQLS VEHNANVESA RQEMWSMRPN
201: DSNILVMKHR MWRVKGIIQV TKSIGDAYLK RAEFNREPLM PKYRVSEHFT EPILSADPSV TVTRLKPEDE FMILASDGLW EHLSNQEAVD IVHSSPRQGV
301: ARRLVKAALK EAAKKREMRY SDLQEINPGV RRHFHDDITV VVVYLDPQMV QANGWASPLS VRGGGYPMQ
101: SEGGEVSEEV IRNAFAETEE DFLTAVKKKW RKSPQMASVG SCCLVGVICN GLVYIANAGD SRAVLGRSER GGGVRAVQLS VEHNANVESA RQEMWSMRPN
201: DSNILVMKHR MWRVKGIIQV TKSIGDAYLK RAEFNREPLM PKYRVSEHFT EPILSADPSV TVTRLKPEDE FMILASDGLW EHLSNQEAVD IVHSSPRQGV
301: ARRLVKAALK EAAKKREMRY SDLQEINPGV RRHFHDDITV VVVYLDPQMV QANGWASPLS VRGGGYPMQ
001: MVKPCWRIGA GMERSKINPT KVDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNPTVQG TFVGVYDGHG GPEASRFIAD NIFPKLKKFA
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS
Arabidopsis Description
Probable protein phosphatase 2C 67 [Source:UniProtKB/Swiss-Prot;Acc:Q501F9]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.