CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005755.1-P	Field mustard	cytosol	99.44	99.44
CDY04862	Canola	cytosol, mitochondrion, plastid	93.0	92.22
CDY10428	Canola	mitochondrion	92.16	90.63
CDX70348	Canola	cytosol, mitochondrion	91.6	90.08
CDX80837	Canola	cytosol, mitochondrion	90.76	89.01
CDY55405	Canola	cytosol, nucleus, plastid	91.32	88.35
CDY40818	Canola	mitochondrion	29.97	84.92
AT5G02760.1	Thale cress	cytosol, mitochondrion	85.71	82.7
CDY51276	Canola	mitochondrion	17.09	73.49
GSMUA_Achr6P15470_001	Banana	mitochondrion	64.71	60.95
GSMUA_Achr6P23480_001	Banana	cytosol	56.3	60.18
CDX76124	Canola	mitochondrion	61.9	59.09
GSMUA_Achr10P...	Banana	cytosol	62.18	59.04
CDY02904	Canola	mitochondrion	61.34	58.56
CDY42159	Canola	cytosol	60.5	56.99
CDY08420	Canola	cytosol, mitochondrion, plastid	60.5	56.99
Os01t0976700-01	Rice	mitochondrion	59.38	56.38
CDY52665	Canola	cytosol	59.66	56.2
TraesCS3A01G538500.1	Wheat	mitochondrion	60.5	55.96
TraesCS3B01G604000.1	Wheat	mitochondrion	60.5	55.96
CDX73725	Canola	vacuole	58.82	55.7
CDX73413	Canola	mitochondrion	60.22	55.56
CDY51441	Canola	mitochondrion	60.22	55.56
TraesCS3D01G544100.1	Wheat	mitochondrion	59.94	55.44
CDY16313	Canola	extracellular	58.54	55.44
CDY50535	Canola	cytosol, mitochondrion, plastid	59.66	55.04
HORVU3Hr1G114160.1	Barley	mitochondrion	47.9	54.98
CDY33283	Canola	plastid	58.54	54.71
CDX90277	Canola	cytosol, mitochondrion, nucleus	57.7	54.21
HORVU3Hr1G117670.6	Barley	mitochondrion	59.94	54.18
CDY12086	Canola	cytosol, mitochondrion, nucleus	57.14	53.68
CDY54807	Canola	nucleus, peroxisome, plastid	56.3	51.54
CDY70696	Canola	extracellular, peroxisome	45.66	50.31
CDY39026	Canola	cytosol, plastid, vacuole	52.1	49.21
CDY34992	Canola	cytosol, plastid, vacuole	52.1	49.21
CDX75902	Canola	plastid	51.82	49.07
TraesCS7A01G386400.1	Wheat	cytosol	19.05	48.57
CDY14069	Canola	cytosol, mitochondrion	50.7	46.29
CDX72438	Canola	mitochondrion	47.9	45.72
CDY49385	Canola	mitochondrion	47.9	45.72
CDY29015	Canola	cytosol	45.94	45.56
CDY05001	Canola	cytosol, mitochondrion	49.86	45.52
CDX70071	Canola	cytosol, mitochondrion	48.18	44.91
CDY28332	Canola	mitochondrion	47.9	44.53
CDY51944	Canola	mitochondrion	47.9	44.42
CDX98953	Canola	cytosol, mitochondrion	47.62	44.39
CDX78002	Canola	vacuole	58.54	41.88
HORVU2Hr1G009490.1	Barley	mitochondrion	17.65	39.87
CDY40354	Canola	cytosol	22.69	33.61
CDY71703	Canola	cytosol	14.57	26.0
CDY43107	Canola	cytosol, nucleus, peroxisome	27.73	20.2
CDX92079	Canola	cytosol, nucleus, peroxisome	27.17	19.56
CDY57256	Canola	cytosol, nucleus, peroxisome	31.93	19.52
CDY71973	Canola	cytosol, nucleus, peroxisome	28.01	18.83
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	30.25	18.59
CDY44706	Canola	nucleus	30.53	18.41
CDY68192	Canola	mitochondrion, nucleus, plastid	28.85	18.23
CDY41610	Canola	nucleus	30.25	18.18
CDY71801	Canola	cytosol	27.73	18.17
CDY59038	Canola	plastid	28.85	17.98
CDY62569	Canola	nucleus	30.81	17.92
CDX95140	Canola	cytosol, mitochondrion, nucleus	30.53	17.58
CDY06718	Canola	mitochondrion, plastid	30.81	17.43
CDY07928	Canola	nucleus	32.21	17.37
CDX73980	Canola	nucleus	31.65	16.97
CDY31682	Canola	nucleus, plastid	29.97	16.09
CDX84217	Canola	nucleus, plastid	29.41	15.84
CDX80059	Canola	cytosol, nucleus, peroxisome	32.21	13.53
CDY41568	Canola	cytosol, nucleus, peroxisome	32.21	13.51

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:A0A078FE49	UniProt:A0A078FE49
EnsemblPlants:CDY11224	ProteinID:CDY11224	ProteinID:CDY11224.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00049245001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF367	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EE13CB	SEG:seg	:	:	:

Description

BnaA03g00600DBnaA03g00600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FE49]

Coordinates

chrLK032010:+:278008..279559

Molecular Weight (calculated)

39938.6 Da

IEP (calculated)

7.111

GRAVY (calculated)

-0.345

Length

357 amino acids

Sequence
(BLAST)

001: MVKPFWRSKI SATKNDGLTW YKDLGLHAFG EFSTAMIQAN SVMEDQCQIE SGPLTFNNSA VHGTFVGVYD GHGGPEASRF IADNIFPNLK KFATESGDIS
101: EEVMRNAFAE TDEDFLTAVK KQWRKNPQMA SVGSCCLAGV ICNGLVYIAN AGDSRAVLGR SERGGVRAVQ LSVEHNANVE SARQELWSMH PNDPNILVMK
201: HRMWRVKGII QVTKSIGDAY LKRAEFNREP LLPKYRVAEH FTEPILSADP SVTVTRLDQE DEFMIFASDG LWEHLSNQEA VDIVHSSPRQ GVARRLLKAA
301: LKEAAKKREM RYSDLKEINP GVRRHFHDDI TVIVVYLDPQ MVQANGWASP LSIRGGY

Best Arabidopsis Sequence Match ( AT5G02760.1 )
(BLAST)

001: MVKPCWRIGA GMERSKINPT KVDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNPTVQG TFVGVYDGHG GPEASRFIAD NIFPKLKKFA
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS

Arabidopsis Description

Probable protein phosphatase 2C 67 [Source:UniProtKB/Swiss-Prot;Acc:Q501F9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.