Factsheet for TraesCS3D01G544100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G538500.1	Wheat	mitochondrion	98.45	98.45
TraesCS3B01G604000.1	Wheat	mitochondrion	97.67	97.67
HORVU3Hr1G114160.1	Barley	mitochondrion	77.2	95.82
HORVU3Hr1G117670.6	Barley	mitochondrion	95.6	93.42
Os01t0976700-01	Rice	mitochondrion	79.53	81.65
HORVU2Hr1G009490.1	Barley	mitochondrion	29.79	72.78
GSMUA_Achr10P...	Banana	cytosol	66.84	68.62
GSMUA_Achr6P23480_001	Banana	cytosol	59.33	68.56
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	66.06	67.28
GSMUA_Achr6P15470_001	Banana	mitochondrion	65.54	66.75
VIT_08s0040g02970.t01	Wine grape	cytosol	65.28	66.49
AT3G12620.2	Thale cress	mitochondrion	66.06	66.23
CDY08420	Canola	cytosol, mitochondrion, plastid	64.77	65.96
CDY42159	Canola	cytosol	64.51	65.7
CDY52665	Canola	cytosol	64.51	65.7
PGSC0003DMT400028715	Potato	cytosol	63.73	65.43
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	65.54	65.37
CDY50535	Canola	cytosol, mitochondrion, plastid	65.54	65.37
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	65.54	65.21
Solyc10g084410.1.1	Tomato	mitochondrion	63.47	65.16
PGSC0003DMT400060005	Potato	cytosol	64.51	64.84
PGSC0003DMT400005115	Potato	cytosol	62.95	64.29
KRH67612	Soybean	cytosol	59.33	64.15
Solyc05g055980.2.1	Tomato	cytosol	51.81	63.69
KRG95894	Soybean	cytosol	60.88	63.51
CDX76124	Canola	mitochondrion	61.4	63.37
Solyc09g007080.2.1	Tomato	cytosol	61.92	63.23
CDY02904	Canola	mitochondrion	60.88	62.83
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	62.18	62.83
AT3G55050.2	Thale cress	mitochondrion	62.18	62.5
KRG93033	Soybean	mitochondrion	61.92	61.6
CDX73413	Canola	mitochondrion	61.66	61.5
KRH19775	Soybean	cytosol	59.07	61.46
CDY51441	Canola	mitochondrion	61.4	61.24
Bra007131.1-P	Field mustard	mitochondrion	61.4	61.24
KRH32367	Soybean	cytosol	58.81	61.19
KRH36281	Soybean	mitochondrion	61.4	60.93
TraesCS7D01G524700.1	Wheat	mitochondrion	61.4	60.46
Bra009569.1-P	Field mustard	mitochondrion	56.74	60.33
CDX70348	Canola	cytosol, mitochondrion	56.74	60.33
CDY11224	Canola	cytosol	55.44	59.94
Bra005755.1-P	Field mustard	cytosol	55.44	59.94
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	60.62	59.69
TraesCS4D01G331100.1	Wheat	mitochondrion	61.66	59.65
CDY10428	Canola	mitochondrion	55.7	59.23
CDY04862	Canola	cytosol, mitochondrion, plastid	55.18	59.17
Bra028865.1-P	Field mustard	mitochondrion	55.18	59.17
AT5G02760.1	Thale cress	cytosol, mitochondrion	56.22	58.65
CDX80837	Canola	cytosol, mitochondrion	54.92	58.24
CDY55405	Canola	cytosol, nucleus, plastid	55.44	57.99
TraesCS2D01G456600.2	Wheat	mitochondrion	53.63	53.08
TraesCS5D01G510100.1	Wheat	plastid	50.52	50.65
TraesCS5D01G085200.1	Wheat	mitochondrion	46.37	46.74
TraesCS5D01G408500.1	Wheat	mitochondrion	44.3	45.97
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	43.01	42.67
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	29.02	18.76
TraesCS2D01G288400.1	Wheat	nucleus	25.65	18.17
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	29.79	18.03
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	26.42	16.86

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF331	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS3D01G544100
EnsemblPlants:TraesCS3D01G544100.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:613779820..613782644

Molecular Weight (calculated)

42811.7 Da

IEP (calculated)

8.640

GRAVY (calculated)

-0.192

Length

386 amino acids

Sequence
(BLAST)

001: MVGQTMMRIV RPCFKPSLPD GAQVVAAGGG GTREGLLWYR DAGRHACGDF SMAVVQANQL LEDASQLEAG PLVAADGPCA TFVGVYDGHG GPETARFVAD
101: NLFHHLKKFA TEQQTVSADV IRRSYAATEE GFLNLVRKQW LIKPQIASVG TCCLVGIINE GVLYIANTGD SRAVLGRLER GVKDIRAVQL SSEHNASFQE
201: VRDELRQMHP DDPRIVVLKH NVWRVKGIIQ VSRTIGDAYL KSSEFNREPL LARFRIPGPF HKPILCPEPS IEEHRLCAED QFVIFASDGL WEHLSNQEAV
301: DIVHCSPRNG IARRLIKAAL REAAKKREMR YSDLKKIDRG VRRHFHDDIT VVVLFMEPAL ISRRLYGGPL LSLRGGGSTP TFAQKC

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.