Factsheet for Bra038738.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50535	Canola	cytosol, mitochondrion, plastid	100.0	100.0
CDY52665	Canola	cytosol	96.64	98.68
AT3G12620.2	Thale cress	mitochondrion	92.76	93.25
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	93.28	93.04
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	75.71	77.31
PGSC0003DMT400060005	Potato	cytosol	74.16	74.74
Solyc05g055980.2.1	Tomato	cytosol	59.69	73.57
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	71.83	72.77
KRG93033	Soybean	mitochondrion	72.35	72.16
Bra007131.1-P	Field mustard	mitochondrion	72.09	72.09
KRH36281	Soybean	mitochondrion	71.06	70.69
GSMUA_Achr10P...	Banana	cytosol	65.37	67.29
GSMUA_Achr6P23480_001	Banana	cytosol	57.62	66.77
Os01t0976700-01	Rice	mitochondrion	64.6	66.49
TraesCS3A01G538500.1	Wheat	mitochondrion	66.15	66.32
GSMUA_Achr6P15470_001	Banana	mitochondrion	64.6	65.96
TraesCS3D01G544100.1	Wheat	mitochondrion	65.37	65.54
TraesCS3B01G604000.1	Wheat	mitochondrion	65.37	65.54
HORVU3Hr1G114160.1	Barley	mitochondrion	52.45	65.27
HORVU3Hr1G117670.6	Barley	mitochondrion	65.37	64.05
Bra010741.1-P	Field mustard	plastid	62.02	63.16
Bra038895.1-P	Field mustard	plastid	62.02	62.83
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	63.31	61.71
Bra009569.1-P	Field mustard	mitochondrion	55.81	59.5
Bra005755.1-P	Field mustard	cytosol	54.78	59.38
TraesCS7A01G386400.1	Wheat	cytosol	21.45	59.29
Bra028865.1-P	Field mustard	mitochondrion	54.26	58.33
Bra021218.1-P	Field mustard	plastid	52.97	54.23
HORVU2Hr1G009490.1	Barley	mitochondrion	20.67	50.63
Bra028720.1-P	Field mustard	mitochondrion	49.61	50.0
Bra036972.1-P	Field mustard	mitochondrion	47.29	48.93
Bra034592.1-P	Field mustard	mitochondrion	48.06	48.31
Bra009224.1-P	Field mustard	cytosol, mitochondrion	42.12	47.25
Bra036813.1-P	Field mustard	vacuole	59.69	46.29
Bra022166.1-P	Field mustard	cytosol	20.16	33.48
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.9	28.73
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	27.91	18.65
Bra041012.1-P	Field mustard	nucleus	28.94	16.52
Bra001308.1-P	Field mustard	nucleus	28.94	16.37
Bra029766.1-P	Field mustard	nucleus	26.87	16.15
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	32.56	14.82
Bra017322.1-P	Field mustard	nucleus	27.13	14.23
Bra009593.1-P	Field mustard	nucleus	29.46	14.18
Bra005350.1-P	Field mustard	mitochondrion, plastid	26.87	13.96

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra038738	EnsemblPlants:Bra038738.1
EnsemblPlants:Bra038738.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0005575	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:M4FCC0	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF358
SMART:SM00332	SUPFAM:SSF81606	TMHMM:TMhelix	UniParc:UPI000254522E	:	:

Description

AT3G12620 (E=3e-206) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA01:+:26375262..26376866

Molecular Weight (calculated)

43049.9 Da

IEP (calculated)

9.493

GRAVY (calculated)

-0.216

Length

387 amino acids

Sequence
(BLAST)

001: MVSETILRIV APCWRKPSVK GDHSTRGDVN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAS VITKAFLATE EEFLSLVRRQ WQTKPQIASV GACCLVGIIC SGSLYIANAG DSRVVLGRLE KAYKIVKAVQ LSSEHNASYE
201: SVREELRLLH PDDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPET FHTPILLAEP AITVHKIHSE DKFLIFASDG LWEHMTNQEA
301: VDIVNTGPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSILRRP LISISGGGEL AGPSSTP

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.