CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36281	Soybean	mitochondrion	95.1	94.86
AT3G12620.2	Thale cress	mitochondrion	73.71	74.29
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	71.91	73.61
CDY08420	Canola	cytosol, mitochondrion, plastid	71.91	73.61
CDY52665	Canola	cytosol	71.39	73.09
CDY42159	Canola	cytosol	71.13	72.82
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	72.68	72.68
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	72.16	72.35
CDY50535	Canola	cytosol, mitochondrion, plastid	72.16	72.35
PGSC0003DMT400060005	Potato	cytosol	70.36	71.09
Solyc05g055980.2.1	Tomato	cytosol	56.19	69.43
AT3G55050.2	Thale cress	mitochondrion	68.3	69.01
CDX76124	Canola	mitochondrion	65.72	68.18
GSMUA_Achr10P...	Banana	cytosol	65.98	68.09
CDY02904	Canola	mitochondrion	65.46	67.91
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	66.49	67.54
CDX73413	Canola	mitochondrion	67.27	67.44
Bra007131.1-P	Field mustard	mitochondrion	67.01	67.18
CDY51441	Canola	mitochondrion	67.01	67.18
GSMUA_Achr6P15470_001	Banana	mitochondrion	65.21	66.75
GSMUA_Achr6P23480_001	Banana	cytosol	55.67	64.67
Os01t0976700-01	Rice	mitochondrion	61.86	63.83
HORVU3Hr1G114160.1	Barley	mitochondrion	50.77	63.34
KRH67612	Soybean	cytosol	58.25	63.31
KRG95894	Soybean	cytosol	60.31	63.24
KRH36089	Soybean	cytosol	64.69	63.22
TraesCS3A01G538500.1	Wheat	mitochondrion	62.11	62.44
KRG90665	Soybean	mitochondrion	63.66	62.22
TraesCS3B01G604000.1	Wheat	mitochondrion	61.86	62.18
KRH69725	Soybean	mitochondrion	62.89	61.93
TraesCS3D01G544100.1	Wheat	mitochondrion	61.6	61.92
KRH07984	Soybean	mitochondrion	62.63	61.68
HORVU3Hr1G117670.6	Barley	mitochondrion	62.37	61.27
KRH32367	Soybean	cytosol	58.51	61.19
KRH19775	Soybean	cytosol	57.73	60.38
KRH11926	Soybean	cytosol	53.09	55.38
KRH50715	Soybean	mitochondrion, peroxisome, plastid	53.35	55.35
KRH02370	Soybean	cytosol, extracellular, plastid	53.09	54.93
KRH36962	Soybean	cytosol	52.84	54.81
TraesCS7A01G386400.1	Wheat	cytosol	19.59	54.29
HORVU2Hr1G009490.1	Barley	mitochondrion	21.65	53.16
KRH38102	Soybean	mitochondrion	50.77	51.17
KRG91074	Soybean	cytosol, mitochondrion	48.97	50.94
KRH71850	Soybean	mitochondrion	47.94	50.82
KRH35699	Soybean	mitochondrion	49.23	50.53
KRH77072	Soybean	cytosol	48.71	50.13
KRH28403	Soybean	cytosol	48.2	49.87
KRG95384	Soybean	mitochondrion	50.0	49.62
KRH37115	Soybean	cytosol, nucleus, peroxisome	24.74	23.47
KRH50856	Soybean	cytosol, nucleus, peroxisome	28.87	21.54
KRH02249	Soybean	cytosol, nucleus, peroxisome	28.87	21.37
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	28.09	18.11
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	27.58	17.92
KRH24796	Soybean	nucleus	31.7	17.08
KRH29800	Soybean	cytosol, nucleus, plastid	31.7	17.08
KRH04317	Soybean	cytosol, nucleus, plastid	30.15	16.69
KRH58222	Soybean	cytosol, nucleus, peroxisome	29.9	16.67
KRH28277	Soybean	plastid	31.19	16.37
KRH77217	Soybean	plastid	30.93	15.94
KRH68360	Soybean	cytosol, nucleus, peroxisome	31.19	13.64
KRG96628	Soybean	cytosol, nucleus, peroxisome	30.67	13.42

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100807559	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EMBL:ACUP02012778
EnsemblPlantsGene:GLYMA_20G244300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K7N5F2
EnsemblPlants:KRG93033	ProteinID:KRG93033	ProteinID:KRG93033.1	ProteinID:KRG93034.1	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF358	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233DE5E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:47438560..47443083

Molecular Weight (calculated)

42723.2 Da

IEP (calculated)

7.343

GRAVY (calculated)

-0.222

Length

388 amino acids

Sequence
(BLAST)

001: MVSATIRRIV SPCWRPSEGE ISSRHGDASG RANGLLWYKD SGRHANGEFS MAVIQANNLL EDQSQLESGP LSLTEGNPQG TFVGIYDGHG GPEAARFVND
101: RLFNNIKKFT SENNGMSADV INKAFLATEE EFLSLVEKLW LHKPPIASVG SCCLIGIICS GELYIANAGD SRAVLGRLDE AMKEIKAIQL SVEHNASHAS
201: VREELHSLHP NDPQIVVMKH QVWRVKGLIQ ISRSIGDAYL KKAEFNKAPL LAKFRLSEPF DQPILKAEPA ILVQKLCPQD QFLILASDGL WEQMSNQEAV
301: DIVQSCPRNG AAKKLVKTAL CEAAKKREMR YSDLRKIDRG VRRHFHDDIT VIVLYLDSNF LSHANSRVPL VSIKGGGDSG YGIGIIDA

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.