CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29800	Soybean	cytosol, nucleus, plastid	95.97	95.97
VIT_06s0004g04600.t01	Wine grape	nucleus	77.64	77.21
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.47	76.49
CDY71801	Canola	cytosol	55.97	73.94
CDY71973	Canola	cytosol, nucleus, peroxisome	54.31	73.63
AT1G07630.1	Thale cress	cytosol, nucleus, peroxisome	67.36	73.26
AT2G28890.1	Thale cress	nucleus	66.11	72.78
PGSC0003DMT400078173	Potato	nucleus	71.94	72.75
Solyc06g076100.2.1	Tomato	nucleus	71.53	72.74
CDY57256	Canola	cytosol, nucleus, peroxisome	58.89	72.6
CDY06718	Canola	mitochondrion, plastid	63.06	71.95
CDX95140	Canola	cytosol, mitochondrion, nucleus	61.67	71.61
Bra041012.1-P	Field mustard	nucleus	67.22	71.39
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	56.81	70.64
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	56.53	70.05
VIT_08s0007g00310.t01	Wine grape	nucleus	63.06	68.17
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	40.14	48.41
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	39.31	47.01
KRH58222	Soybean	cytosol, nucleus, peroxisome	43.06	44.54
KRH04317	Soybean	cytosol, nucleus, plastid	43.19	44.37
KRH77217	Soybean	plastid	44.72	42.76
KRH28277	Soybean	plastid	43.47	42.35
KRH68360	Soybean	cytosol, nucleus, peroxisome	45.0	36.53
KRG96628	Soybean	cytosol, nucleus, peroxisome	45.0	36.53
KRH37115	Soybean	cytosol, nucleus, peroxisome	20.56	36.19
KRH02249	Soybean	cytosol, nucleus, peroxisome	25.56	35.11
KRH50856	Soybean	cytosol, nucleus, peroxisome	25.0	34.62
KRH67612	Soybean	cytosol	16.94	34.17
KRH36089	Soybean	cytosol	18.47	33.5
KRH19775	Soybean	cytosol	17.22	33.42
KRH32367	Soybean	cytosol	17.08	33.15
KRG90665	Soybean	mitochondrion	18.19	33.0
KRG95894	Soybean	cytosol	16.81	32.7
KRH50715	Soybean	mitochondrion, peroxisome, plastid	16.94	32.62
KRH02370	Soybean	cytosol, extracellular, plastid	16.81	32.27
KRH69725	Soybean	mitochondrion	17.64	32.23
KRH07984	Soybean	mitochondrion	17.5	31.98
KRH11926	Soybean	cytosol	16.39	31.72
KRG93033	Soybean	mitochondrion	17.08	31.7
KRH36281	Soybean	mitochondrion	16.94	31.36
KRH36962	Soybean	cytosol	16.25	31.28
KRH77072	Soybean	cytosol	15.42	29.44
KRH28403	Soybean	cytosol	15.28	29.33
KRH71850	Soybean	mitochondrion	14.72	28.96
KRG95384	Soybean	mitochondrion	15.56	28.64
KRH35699	Soybean	mitochondrion	15.0	28.57
KRG91074	Soybean	cytosol, mitochondrion	14.72	28.42
KRH38102	Soybean	mitochondrion	15.14	28.31

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100812903	MapMan:18.4.24.2.3	EMBL:ACUP02007186	EnsemblPlantsGene:GLYMA_12G063100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1LQQ6	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH24796	ProteinID:KRH24796	ProteinID:KRH24796.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000233D2EB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:4635149..4638637

Molecular Weight (calculated)

79945.3 Da

IEP (calculated)

5.246

GRAVY (calculated)

-0.482

Length

720 amino acids

Sequence
(BLAST)

001: MGNGIGKLTV CFTGNGGGGR RKQDISFLIT EPLDEGLGHS FCYVRPDPTR ISSSKVHSEE TTTFRTISGA SVSANTSTPL STAFVDLYSY SCIDRAAAFE
101: SSTSFAALPL QPIPRNLVNS GPFSGNLNGG GFPGSGPLER GFMSGPIERG FMSGPIDRGL FSGPMEREGN GIGNGSDQFQ RSFSHGGLGL GLGMRVRTRK
201: GRWIRVLQRA ISKTLSRGQS SIVAPIKGVV MKEPEWMVMA AAEKHNENLS VNLSSEGSLE DDDSMESQNL QWAQGKAGED RVHVVVSEEH GWVFVGIYDG
301: FSGPDAPDYL LSNLYTAVHK ELKGLLWDDR SAPENSMPKE DMLRDVTTDV ADFTVADEDD ACSHCVEQDN NDNNSKSGNK RGRNSRNKFQ GAAKKWEENQ
401: RRWKCEWDRE RLELDRRLKE QLNLSRSGSG GAASSINHSD VLEALSRALR KTEESYLDVA DKMLMENPEL ALMGSCVLVM LMKGEDVYVM NVGDSRAVLA
501: QKVEPDYWLG KIRQDLERIN EETMNDLESW DVDTSNLVPS LSAIQLTKDH STSVEEEIQK IKKDHPDDPF AVVNDRVKGS LKVTRAFGAG FLKQPKWNNA
601: LLEMFRIDYV GNSPYISCLP YLKHHRLGPK DKFLILCSDG LYQYLSNEEA VAEVELFITL QPEGDPAQHL VEEVLFRAAK KAGLDFHELL EIPQGDRRRY
701: HDDVSIIVIS LEGRIWRSCV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.