CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67612	Soybean	cytosol	93.51	96.92
KRH19775	Soybean	cytosol	76.76	76.55
KRH32367	Soybean	cytosol	76.49	76.28
VIT_08s0040g02970.t01	Wine grape	cytosol	71.35	69.66
Solyc09g007080.2.1	Tomato	cytosol	65.14	63.76
PGSC0003DMT400005115	Potato	cytosol	65.14	63.76
PGSC0003DMT400028715	Potato	cytosol	64.59	63.56
GSMUA_Achr10P...	Banana	cytosol	64.32	63.3
GSMUA_Achr6P23480_001	Banana	cytosol	56.76	62.87
Solyc10g084410.1.1	Tomato	mitochondrion	63.51	62.5
GSMUA_Achr6P15470_001	Banana	mitochondrion	63.78	62.27
TraesCS3B01G604000.1	Wheat	mitochondrion	64.05	61.4
TraesCS3A01G538500.1	Wheat	mitochondrion	63.78	61.14
TraesCS3D01G544100.1	Wheat	mitochondrion	63.51	60.88
HORVU3Hr1G114160.1	Barley	mitochondrion	51.08	60.77
KRH36281	Soybean	mitochondrion	63.78	60.67
KRG93033	Soybean	mitochondrion	63.24	60.31
KRG90665	Soybean	mitochondrion	64.59	60.2
Os01t0976700-01	Rice	mitochondrion	61.08	60.11
HORVU3Hr1G117670.6	Barley	mitochondrion	63.78	59.75
KRH36089	Soybean	cytosol	63.51	59.19
KRH69725	Soybean	mitochondrion	62.7	58.88
KRH07984	Soybean	mitochondrion	62.43	58.63
KRH02370	Soybean	cytosol, extracellular, plastid	55.41	54.67
KRH50715	Soybean	mitochondrion, peroxisome, plastid	55.14	54.55
KRH36962	Soybean	cytosol	55.14	54.55
KRH11926	Soybean	cytosol	54.32	54.03
TraesCS7A01G386400.1	Wheat	cytosol	20.27	53.57
KRH38102	Soybean	mitochondrion	52.43	50.39
KRH71850	Soybean	mitochondrion	49.46	50.0
HORVU2Hr1G009490.1	Barley	mitochondrion	21.08	49.37
KRH28403	Soybean	cytosol	49.19	48.53
KRG91074	Soybean	cytosol, mitochondrion	48.92	48.53
KRH77072	Soybean	cytosol	49.19	48.28
KRH35699	Soybean	mitochondrion	48.65	47.62
KRG95384	Soybean	mitochondrion	48.92	46.29
KRH37115	Soybean	cytosol, nucleus, peroxisome	25.95	23.47
KRH50856	Soybean	cytosol, nucleus, peroxisome	29.73	21.15
KRH02249	Soybean	cytosol, nucleus, peroxisome	29.73	20.99
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	28.38	17.44
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	28.11	17.42
KRH24796	Soybean	nucleus	32.7	16.81
KRH29800	Soybean	cytosol, nucleus, plastid	32.43	16.67
KRH04317	Soybean	cytosol, nucleus, plastid	31.08	16.41
KRH58222	Soybean	cytosol, nucleus, peroxisome	30.81	16.38
KRH28277	Soybean	plastid	32.7	16.37
KRH77217	Soybean	plastid	32.16	15.8
KRH68360	Soybean	cytosol, nucleus, peroxisome	32.43	13.53
KRG96628	Soybean	cytosol, nucleus, peroxisome	31.89	13.3

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100791448	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EMBL:ACUP02012140
EnsemblPlantsGene:GLYMA_19G176600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1NA36	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRG95894	ProteinID:KRG95894	ProteinID:KRG95894.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF367
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233F2F7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:+:43641629..43645025

Molecular Weight (calculated)

41132.0 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.272

Length

370 amino acids

Sequence
(BLAST)

001: MVRFCWRPAA VGDDGDVNGR VEGLLWYKDL GNHLYGDFSM AVIQANSSLE DRSQLESGPL TSDYLGPQGT FIGVYDGHGG TAASQFVSDN LFCNFKNFAG
101: EHQGISENVI QRAFSATEEG FLSVVRKQWL SKPQIASAGT CCLAGIICNG MLYVANAGDS RAVLGRVERA TRETTTIQLS AEHNVNIQTE RDEVRTKHPY
201: DPQIVVMKHN VWRVKGIIQV SRSIGDAYLK KDEFNREPLP NKFRLSEPFS KPILSYEPAI SVHKLRPEDQ FIIFASDGLW EQLSNQEVVN IVSNSPRNGI
301: ARRLVKAALR VAARKREMRV SDLQKIEQGV RRHFHDDITV IVVFLNHKLI DNSSLLASPL SIKGGGSASF

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.