CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50856	Soybean	cytosol, nucleus, peroxisome	94.08	94.81
KRH37115	Soybean	cytosol, nucleus, peroxisome	62.4	79.95
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	71.76	74.75
Bra022166.1-P	Field mustard	cytosol	31.3	70.39
GSMUA_Achr10P...	Banana	cytosol	44.85	66.2
PGSC0003DMT400011807	Potato	nucleus	62.02	65.52
AT3G16560.1	Thale cress	cytosol, nucleus, peroxisome	61.45	65.31
CDY43107	Canola	cytosol, nucleus, peroxisome	60.31	64.49
CDX92079	Canola	cytosol, nucleus, peroxisome	60.69	64.11
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	37.79	62.46
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	61.83	62.19
Solyc12g099600.1.1	Tomato	plasma membrane	61.83	56.35
EES12087	Sorghum	cytosol	54.2	54.51
HORVU2Hr1G071850.2	Barley	nucleus	53.44	53.95
TraesCS2B01G307000.1	Wheat	nucleus	53.24	53.76
TraesCS2A01G290500.1	Wheat	nucleus	53.24	53.76
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	53.44	53.74
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	53.24	53.55
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	52.86	53.27
TraesCS2D01G288400.1	Wheat	nucleus	52.86	50.83
KRH67612	Soybean	cytosol	20.61	30.25
KRG95894	Soybean	cytosol	20.99	29.73
KRG93033	Soybean	mitochondrion	21.37	28.87
KRH36281	Soybean	mitochondrion	21.37	28.79
KRH19775	Soybean	cytosol	20.23	28.57
KRH32367	Soybean	cytosol	20.04	28.3
KRH02370	Soybean	cytosol, extracellular, plastid	19.66	27.47
KRH50715	Soybean	mitochondrion, peroxisome, plastid	19.47	27.27
KRH36089	Soybean	cytosol	20.61	27.2
KRH07984	Soybean	mitochondrion	20.42	27.16
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	30.73	26.97
KRH69725	Soybean	mitochondrion	20.23	26.9
KRH58222	Soybean	cytosol, nucleus, peroxisome	35.69	26.87
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	30.53	26.58
KRG90665	Soybean	mitochondrion	20.04	26.45
KRH04317	Soybean	cytosol, nucleus, plastid	35.31	26.39
KRG91074	Soybean	cytosol, mitochondrion	18.51	26.01
KRH77072	Soybean	cytosol	18.7	25.99
KRH35699	Soybean	mitochondrion	18.7	25.93
KRH28403	Soybean	cytosol	18.51	25.87
KRH36962	Soybean	cytosol	18.32	25.67
KRH24796	Soybean	nucleus	35.11	25.56
KRH29800	Soybean	cytosol, nucleus, plastid	34.92	25.42
KRG95384	Soybean	mitochondrion	18.89	25.32
KRH11926	Soybean	cytosol	17.94	25.27
KRH28277	Soybean	plastid	34.92	24.76
KRH77217	Soybean	plastid	35.11	24.44
KRH38102	Soybean	mitochondrion	17.75	24.16
KRH71850	Soybean	mitochondrion	16.79	24.04
KRH68360	Soybean	cytosol, nucleus, peroxisome	35.5	20.97
KRG96628	Soybean	cytosol, nucleus, peroxisome	35.31	20.86

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102666789	MapMan:18.4.24.2.3	EMBL:ACUP02010299	EnsemblPlantsGene:GLYMA_17G026100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1MRH9	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH02249	ProteinID:KRH02249	ProteinID:KRH02249.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF309	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002953F83	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:1922609..1925789

Molecular Weight (calculated)

57142.0 Da

IEP (calculated)

5.521

GRAVY (calculated)

-0.167

Length

524 amino acids

Sequence
(BLAST)

001: MLNSEGELKI SFGYKCNRDR GIPCEVVSGC KILPGVCRTS SFSCLSGAAL SANATLANTN ICNGKIGEEI LPSWDSPTSF RKVTSSPSLS KLDILSSSPP
101: NSLSYLSCSP STVSDILEYD SCTLKSMSDP SRSEGFLNAK EVQVAGGAAG EDRVQAVCSE ENGWLFCAIY DGFNGRDAAD FLAGTLYETI ISYFNKLIWE
201: LEPGSIKAYD KGCLGGSLQY KLDDSLIYHE NQSLSRFKGI NNSNHGCFAK CNPSTKSEVS CDSFSHGVLD ILQRAISQAE NDFLYMVEQE MEERPDLVSI
301: GSCVLLVLLH GNDLYTLNLG DSRAVLATCG TADRMDKSER LKAIQLTDNH TVDNKVERAR LLADHPDDPK IVIAGKVKGK LKVTRAFGVG YLKKKSLNDA
401: LMGILRVHDL KSPPYISTNP SLNVHRISNS DQFVIVGSDG LFDFFSNDEA VKLVESYILN NPFGDPAKFL IEQLVARAAD SAGLSMEELM NIPAGRRRKY
501: HDDVTVIVIM LGMNQRTSKA STCI

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.