CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022166.1-P	Field mustard	cytosol	41.32	72.53
GSMUA_Achr10P...	Banana	cytosol	55.99	64.51
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	49.14	63.41
KRH50856	Soybean	cytosol, nucleus, peroxisome	79.71	62.69
KRH02249	Soybean	cytosol, nucleus, peroxisome	79.95	62.4
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	69.19	56.26
PGSC0003DMT400011807	Potato	nucleus	62.1	51.21
AT3G16560.1	Thale cress	cytosol, nucleus, peroxisome	60.39	50.1
CDY43107	Canola	cytosol, nucleus, peroxisome	59.41	49.59
CDX92079	Canola	cytosol, nucleus, peroxisome	59.66	49.19
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	62.59	49.14
Solyc12g099600.1.1	Tomato	plasma membrane	62.35	44.35
EES12087	Sorghum	cytosol	54.52	42.8
HORVU2Hr1G071850.2	Barley	nucleus	53.55	42.2
TraesCS2B01G307000.1	Wheat	nucleus	53.3	42.0
TraesCS2A01G290500.1	Wheat	nucleus	53.3	42.0
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	53.3	41.92
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	53.3	41.84
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	53.3	41.84
TraesCS2D01G288400.1	Wheat	nucleus	53.3	40.0
KRH67612	Soybean	cytosol	23.23	26.61
KRG95894	Soybean	cytosol	23.47	25.95
KRG93033	Soybean	mitochondrion	23.47	24.74
KRH19775	Soybean	cytosol	22.25	24.53
KRH36281	Soybean	mitochondrion	23.23	24.42
KRH07984	Soybean	mitochondrion	23.47	24.37
KRH32367	Soybean	cytosol	22.0	24.26
KRH36089	Soybean	cytosol	23.47	24.18
KRH69725	Soybean	mitochondrion	23.23	24.11
KRG90665	Soybean	mitochondrion	22.98	23.68
KRH50715	Soybean	mitochondrion, peroxisome, plastid	21.52	23.53
KRH28403	Soybean	cytosol	21.52	23.47
KRH02370	Soybean	cytosol, extracellular, plastid	21.52	23.47
KRH77072	Soybean	cytosol	21.52	23.34
KRG91074	Soybean	cytosol, mitochondrion	21.27	23.32
KRH35699	Soybean	mitochondrion	21.52	23.28
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	33.5	22.95
KRH36962	Soybean	cytosol	20.54	22.46
KRH58222	Soybean	cytosol, nucleus, peroxisome	38.14	22.41
KRH71850	Soybean	mitochondrion	20.05	22.4
KRH11926	Soybean	cytosol	20.29	22.31
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	32.52	22.09
KRH04317	Soybean	cytosol, nucleus, plastid	37.65	21.97
KRG95384	Soybean	mitochondrion	20.78	21.74
KRH28277	Soybean	plastid	38.39	21.24
KRH38102	Soybean	mitochondrion	19.8	21.04
KRH77217	Soybean	plastid	38.63	20.98
KRH24796	Soybean	nucleus	36.19	20.56
KRH29800	Soybean	cytosol, nucleus, plastid	35.94	20.42
KRH68360	Soybean	cytosol, nucleus, peroxisome	37.9	17.47
KRG96628	Soybean	cytosol, nucleus, peroxisome	37.65	17.36

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	EMBL:ACUP02005416	EnsemblPlantsGene:GLYMA_09G045100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
UniProt:K7LBT3	EnsemblPlants:KRH37115	ProteinID:KRH37115	ProteinID:KRH37115.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF538	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI00023CAC45	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:3862426..3864274

Molecular Weight (calculated)

45170.5 Da

IEP (calculated)

4.609

GRAVY (calculated)

-0.224

Length

409 amino acids

Sequence
(BLAST)

001: MLEYDPFTLR SISAPSRSEG FLNGMEVQVA GGAAGEDRVQ AVCSEEDGWL FCAIYDGFNG RDAADFLAGT LYDSIISYFN MLYWDLEPDS LKASNNESMG
101: GSFQYNFNDS LNLQERQSLS KIKGNNSSLD CFANNIPHSK SKASPKSFSQ TTVLDGLQHV LSQAENDFLY MVEQEMEERP DLVSIGSCVL LVLLHGNDLY
201: TLNLGDSRAV LATCITDNSL NANERLKAIQ LTESHTVDNE AERARLLADH PDDPKTIVAG KVKGKLKVTR ALGVGYLKKK ILNDALMGIL RVRDLKSPPY
301: VSTDPSLNVH KISDSDQFVI VGSDGLFDFF SNDEAVQLVE SYILRNPFGD PAKFLIEQLV ARAADSAGFS MEELMNVPDG RRRKYHDDVT VMVIILGMNQ
401: RTSKASICL

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.