CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58222	Soybean	cytosol, nucleus, peroxisome	91.58	92.24
KRH28277	Soybean	plastid	71.9	68.2
KRH77217	Soybean	plastid	72.61	67.6
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	73.18	65.18
CDY68192	Canola	mitochondrion, nucleus, plastid	51.21	63.54
CDY59038	Canola	plastid	50.93	62.3
Solyc08g007000.2.1	Tomato	nucleus	68.19	61.2
PGSC0003DMT400045127	Potato	nucleus	68.76	60.4
PGSC0003DMT400052881	Potato	nucleus	67.19	60.31
Solyc08g077150.2.1	Tomato	nucleus	68.33	60.18
GSMUA_Achr5P13850_001	Banana	nucleus	51.78	59.7
CDY31682	Canola	nucleus, plastid	56.63	59.7
CDX84217	Canola	nucleus, plastid	56.21	59.43
Zm00001d019519_P001	Maize	extracellular	10.56	56.92
Bra017322.1-P	Field mustard	nucleus	59.34	56.37
Bra005350.1-P	Field mustard	mitochondrion, plastid	59.77	56.24
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	47.79	56.11
TraesCS6A01G263600.1	Wheat	plastid	47.79	56.11
TraesCS6B01G290600.1	Wheat	plastid	47.79	56.11
EES07427	Sorghum	plastid	47.93	56.09
HORVU6Hr1G066850.2	Barley	plastid	47.65	55.95
Os02t0690500-01	Rice	plastid	47.36	55.7
Zm00001d017670_P001	Maize	plastid	47.36	55.43
AT2G35350.1	Thale cress	nucleus	60.2	53.9
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	17.97	48.28
KRH24796	Soybean	nucleus	44.37	43.19
KRH29800	Soybean	cytosol, nucleus, plastid	44.22	43.06
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	35.24	41.37
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	35.38	41.2
KRH37115	Soybean	cytosol, nucleus, peroxisome	21.97	37.65
KRH68360	Soybean	cytosol, nucleus, peroxisome	45.93	36.3
KRG96628	Soybean	cytosol, nucleus, peroxisome	45.65	36.08
KRH50856	Soybean	cytosol, nucleus, peroxisome	26.39	35.58
KRH02249	Soybean	cytosol, nucleus, peroxisome	26.39	35.31
KRH32367	Soybean	cytosol	17.55	33.15
KRH19775	Soybean	cytosol	17.26	32.61
KRH67612	Soybean	cytosol	16.26	31.93
KRG95894	Soybean	cytosol	16.41	31.08
KRG93033	Soybean	mitochondrion	16.69	30.15
KRH50715	Soybean	mitochondrion, peroxisome, plastid	15.98	29.95
KRH36089	Soybean	cytosol	16.83	29.72
KRH36281	Soybean	mitochondrion	16.41	29.56
KRH69725	Soybean	mitochondrion	16.55	29.44
KRH02370	Soybean	cytosol, extracellular, plastid	15.69	29.33
KRG90665	Soybean	mitochondrion	16.55	29.22
KRH07984	Soybean	mitochondrion	16.26	28.93
KRH11926	Soybean	cytosol	14.98	28.23
KRH36962	Soybean	cytosol	14.98	28.07
KRG95384	Soybean	mitochondrion	15.55	27.88
KRH35699	Soybean	mitochondrion	14.98	27.78
KRH28403	Soybean	cytosol	14.84	27.73
KRG91074	Soybean	cytosol, mitochondrion	14.69	27.61
KRH71850	Soybean	mitochondrion	14.41	27.6
KRH77072	Soybean	cytosol	14.69	27.32
KRH38102	Soybean	mitochondrion	14.84	27.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100779143	MapMan:18.4.24.2.3	EMBL:ACUP02010398	ncoils:Coil
EnsemblPlantsGene:GLYMA_17G153800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:K7MLT7	ProteinID:KRH04316.1	EnsemblPlants:KRH04317	ProteinID:KRH04317	ProteinID:KRH04317.1
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF241	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233F3A8	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:12914000..12919046

Molecular Weight (calculated)

77633.8 Da

IEP (calculated)

5.475

GRAVY (calculated)

-0.447

Length

701 amino acids

Sequence
(BLAST)

001: MGSGVSTLCW CSRINEPDVI FTATDPLDET LGHSFCYVRS SARFLSPTRF LSPSTSLRFS PTHEPRTRPE FHETGFKAIS GASVSANSSL PATVIRLDEE
101: VNGVSSRGNI INGFESTASF SALPLQPVPR GGEPFEVSGF FLSGPIESNA VSGPLPAAAD FVGGGEIPFS APLAGLYGKK NRKKKMISGF RKAFNRNAPE
201: KKRPWVVPVL NFAGRKESEG KPPPLPEEKS NVQWALGKAG EDRVHVVVSE EQGWLFVGIY DGFNGGDAPE FLMGNLYRAV HNELQGLFWE LEEEQQEQEQ
301: QQPLPQESNP VVEGTESKRR KLWELLAEDG LDLSGSDRFA FSVDDALSVN NANAGSAVSR RWLLLSKLKH GLRKQKEGGG RGWNLGNEEK EKEKENQEKH
401: CGRKRRVGPV DHGLVLSALS RALEFTELAY LDMTDKLLDT NPELALMGSC LLVALMRDED VYLMNVGDSR AIVAHYEQKE VDSCVELGSK GGVESGGAES
501: IVEEPLGLGQ IGSAQQQRLV ALQLSTDHST NIEEEVIRIK NEHPDDAQCI LNDRVKGRLK VTRAFGAGFL KQPKWNDAVL EMFRNEYIGT APYISCSPSL
601: RHHRLCQRDQ FLILSSDGLY QYLSNEEVVS HVESFMEKFP EGDPAQHLIE ELLLHAAKKA GMDFHELLDI PQGDRRKYHD DVTVMVISLE GRIWKSSGKY
701: P

Best Arabidopsis Sequence Match ( AT2G35350.1 )
(BLAST)

001: MGSGFSSLLP CFNQGHRNRR RHSSAANPSH SDLIDSFREP LDETLGHSYC YVPSSSNRFI SPFPSDRFVS PTASFRLSPP HEPGRIRGSG SSEQLHTGFR
101: AISGASVSAN TSNSKTVLQL EDIYDDATES SFGGGVRRSV VNANGFEGTS SFSALPLQPG PDRSGLFMSG PIERGATSGP LDPPAGEISR SNSAGVHFSA
201: PLGGVYSKKR RKKKKKSLSW HPIFGGEKKQ RPWVLPVSNF VVGAKKENIV RPDVEAMAAS SGENDLQWAL GKAGEDRVQL AVFEKQGWLF AGIYDGFNGP
301: DAPEFLMANL YRAVHSELQG LFWELEEEDD NPTDISTREL EQQGEFEDHV NEMASSSCPA TEKEEEEMGK RLTSSLEVVE VKERKRLWEL LAEAQAEDAL
401: DLSGSDRFAF SVDDAIGAGN AVSVGSKRWL LLSKLKQGLS KQGISGRKLF PWKSGVEENE TEEVDNVGVE EGVDKRRKRR KAGTVDHELV LKAMSNGLEA
501: TEQAFLEMTD KVLETNPELA LMGSCLLVAL MRDDDVYIMN IGDSRALVAQ YQVEETGESV ETAERVEERR NDLDRDDGNK EPLVVDSSDS TVNNEAPLPQ
601: TKLVALQLTT DHSTSIEDEV TRIKNEHPDD NHCIVNDRVK GRLKVTRAFG AGFLKQPKLN DALLEMFRNE YIGTDPYISC TPSLRHYRLT ENDQFMVLSS
701: DGLYQYLSNV EVVSLAMEKF PDGDPAQHVI QELLVRAAKK AGMDFHELLD IPQGDRRKYH DDCTVLVIAL GGSRIWKSSG KYL

Arabidopsis Description

PLL1PLL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.