Factsheet for GSMUA_Achr5P13850_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019519_P001	Maize	extracellular	13.16	61.54
Os02t0690500-01	Rice	plastid	56.25	57.38
EES07427	Sorghum	plastid	56.41	57.26
Zm00001d017670_P001	Maize	plastid	55.92	56.76
TraesCS6A01G263600.1	Wheat	plastid	55.43	56.45
TraesCS6B01G290600.1	Wheat	plastid	55.43	56.45
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	55.26	56.28
HORVU6Hr1G066850.2	Barley	plastid	55.1	56.11
KRH58222	Soybean	cytosol, nucleus, peroxisome	60.53	52.87
KRH04317	Soybean	cytosol, nucleus, plastid	59.7	51.78
CDY68192	Canola	mitochondrion, nucleus, plastid	48.03	51.68
CDY59038	Canola	plastid	47.04	49.91
KRH77217	Soybean	plastid	61.51	49.67
KRH28277	Soybean	plastid	60.36	49.66
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	62.99	48.67
CDY31682	Canola	nucleus, plastid	53.12	48.57
CDX84217	Canola	nucleus, plastid	52.8	48.42
GSMUA_Achr2P16350_001	Banana	mitochondrion	44.08	48.11
Solyc08g007000.2.1	Tomato	nucleus	61.51	47.89
GSMUA_Achr5P29080_001	Banana	mitochondrion	45.23	47.66
PGSC0003DMT400052881	Potato	nucleus	60.86	47.38
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	45.07	47.0
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	48.03	46.42
Solyc08g077150.2.1	Tomato	nucleus	60.53	46.23
PGSC0003DMT400045127	Potato	nucleus	60.53	46.12
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	19.57	45.59
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	42.93	45.47
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	44.57	44.5
Bra005350.1-P	Field mustard	mitochondrion, plastid	54.44	44.43
Bra017322.1-P	Field mustard	nucleus	53.45	44.04
GSMUA_Achr10P...	Banana	cytosol	25.0	42.82
AT2G35350.1	Thale cress	nucleus	54.77	42.53
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	49.01	40.05
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	27.47	35.01
GSMUA_Achr6P23480_001	Banana	cytosol	17.6	32.04
GSMUA_Achr4P04870_001	Banana	cytosol	17.27	30.7
GSMUA_Achr6P11170_001	Banana	cytosol	18.75	30.32
GSMUA_Achr3P02220_001	Banana	mitochondrion	18.42	29.79
GSMUA_Achr6P15470_001	Banana	mitochondrion	18.42	29.55
GSMUA_Achr2P21550_001	Banana	mitochondrion	18.75	29.53
GSMUA_Achr3P00610_001	Banana	cytosol	16.78	29.31
GSMUA_Achr10P...	Banana	cytosol	17.6	28.46
GSMUA_Achr5P11520_001	Banana	mitochondrion	18.09	27.78
GSMUA_Achr8P13470_001	Banana	mitochondrion	17.43	27.75
GSMUA_Achr11P...	Banana	mitochondrion	17.11	27.51
GSMUA_Achr4P14220_001	Banana	mitochondrion	16.78	27.35
GSMUA_Achr2P02070_001	Banana	mitochondrion	16.61	27.15
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	16.94	26.89
GSMUA_Achr8P13120_001	Banana	cytosol	17.27	26.79
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	17.43	26.7
GSMUA_Achr3P26820_001	Banana	mitochondrion	16.78	25.89
GSMUA_Achr9P24110_001	Banana	cytosol	16.78	25.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0005543	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0008289	GO:GO:0009058	GO:GO:0009653	GO:GO:0009826	GO:GO:0009933	GO:GO:0009987
GO:GO:0010074	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0019538
GO:GO:0040007	EnsemblPlantsGene:GSMUA_Achr5G13850_001	EnsemblPlants:GSMUA_Achr5P13850_001	EnsemblPlants:GSMUA_Achr5T13850_001	InterPro:IPR001932	InterPro:IPR036457
UniProt:M0SYB4	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF241	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00029505BE	SEG:seg

Description

Probable protein phosphatase 2C 26 [Source:GMGC_GENE;Acc:GSMUA_Achr5G13850_001]

Coordinates

chr5:+:9955770..9961098

Molecular Weight (calculated)

66709.0 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.380

Length

608 amino acids

Sequence
(BLAST)

001: MGSGASRHGL LHCLRPSAGA ADVGDSDGGR PTFELGPLEE TLGHSFCYVR SSSPVHSRAS SVSSAGGDGG GETAFKTISG ASVSANSSAP LPLYDAAGRP
101: HPAGFRSSSS FSALPLQLSA AGCGGGCAAS GPLDRGFFMS GPIERGALSG PLEPVPFSGP LVKKKRRGIA RRFRKPLLLR RSISEKNRPW VFPLRSFPSR
201: QGDQQEDPAA AATEGNVQWA HGKAGEDRVH VVVSEEQRWL FVGIYDGFNG PEAPEFLVGN LYRAVFNELR GLFWEEVEEG GAEDEGLEEG SEKKVTFQED
301: SKVARRLYGI GSWRKEGRRI SRRRRRKKGP VAEHGLVLAA LARALEVTEV EYLEMTDRVM DCNPELALMG SCLLVVLMRD EDVYVMNVGD SRAIVAQYRP
401: QGHIEGRNNE SMEIEGLSRG VIELGALQLS TDHSTSIEEE VLRIRREHPD DNKCIFNDRV KGRLKVTRAF GAGYLKQPKW NNALLEMFRN EYIGTAPYIS
501: STPSLCHHKL GANDHFLILS SDGLYQYLSN EEVVLHVESF MERFPDGDPA QSLIEELLFR AANQAGLDFC ELLDIPQGDR RKYHDDVTVM VISLEGRIWK
601: SSGKCVAC

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.