Factsheet for GSMUA_Achr3P26820_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P04870_001	Banana	cytosol	76.9	88.6
GSMUA_Achr3P00610_001	Banana	cytosol	75.38	85.34
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	81.47	80.86
Os06t0717800-01	Rice	mitochondrion	78.68	79.08
Zm00001d014797_P001	Maize	mitochondrion	78.93	78.93
EER90402	Sorghum	mitochondrion	77.92	78.92
KRH69725	Soybean	mitochondrion	78.43	78.43
Solyc03g033340.2.1	Tomato	mitochondrion	78.93	78.34
PGSC0003DMT400058098	Potato	mitochondrion	78.68	78.09
PGSC0003DMT400009248	Potato	mitochondrion	77.16	77.95
KRH07984	Soybean	mitochondrion	77.92	77.92
VIT_03s0038g02650.t01	Wine grape	mitochondrion	78.43	77.83
KRH36089	Soybean	cytosol	78.17	77.58
Solyc02g083420.2.1	Tomato	mitochondrion	76.65	77.44
GSMUA_Achr9P24110_001	Banana	cytosol	78.43	77.25
CDY16313	Canola	extracellular	73.6	76.92
KRG90665	Soybean	mitochondrion	77.41	76.83
Bra038895.1-P	Field mustard	plastid	73.6	75.92
CDY33283	Canola	plastid	73.6	75.92
CDX73725	Canola	vacuole	72.33	75.6
HORVU7Hr1G117970.1	Barley	mitochondrion	75.13	75.51
TraesCS7B01G455500.1	Wheat	mitochondrion	75.13	75.51
TraesCS7A01G537000.1	Wheat	mitochondrion	75.13	75.51
GSMUA_Achr8P13120_001	Banana	cytosol	74.87	75.26
AT3G51370.1	Thale cress	cytosol, extracellular	72.33	75.2
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	73.86	75.0
PGSC0003DMT400046486	Potato	mitochondrion	73.86	75.0
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	72.84	74.93
TraesCS7D01G524700.1	Wheat	mitochondrion	74.37	74.74
GSMUA_Achr5P11520_001	Banana	mitochondrion	74.87	74.49
Solyc10g055650.1.1	Tomato	cytosol	63.71	74.04
AT5G66080.1	Thale cress	plastid	72.08	73.77
PGSC0003DMT400068706	Potato	mitochondrion	71.07	73.11
AT4G38520.1	Thale cress	mitochondrion	71.07	70.0
CDY12086	Canola	cytosol, mitochondrion, nucleus	67.01	69.47
CDX90277	Canola	cytosol, mitochondrion, nucleus	66.75	69.21
Bra010741.1-P	Field mustard	plastid	66.24	68.68
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	69.04	68.51
VIT_00s0434g00020.t01	Wine grape	cytosol	70.81	68.38
GSMUA_Achr10P...	Banana	cytosol	65.23	68.35
GSMUA_Achr6P23480_001	Banana	cytosol	57.36	67.66
GSMUA_Achr6P15470_001	Banana	mitochondrion	64.72	67.28
CDY54807	Canola	nucleus, peroxisome, plastid	64.72	65.38
CDY70696	Canola	extracellular, peroxisome	53.05	64.51
CDY29015	Canola	cytosol	54.06	59.17
Zm00001d036395_P008	Maize	mitochondrion	78.17	57.89
GSMUA_Achr11P...	Banana	mitochondrion	54.82	57.14
Bra036813.1-P	Field mustard	vacuole	72.08	56.91
CDX78002	Canola	vacuole	72.08	56.91
GSMUA_Achr2P02070_001	Banana	mitochondrion	52.03	55.11
GSMUA_Achr6P11170_001	Banana	cytosol	51.27	53.72
GSMUA_Achr8P13470_001	Banana	mitochondrion	50.76	52.36
GSMUA_Achr4P14220_001	Banana	mitochondrion	47.46	50.13
GSMUA_Achr2P21550_001	Banana	mitochondrion	47.97	48.96
GSMUA_Achr3P02220_001	Banana	mitochondrion	46.45	48.67
GSMUA_Achr10P...	Banana	cytosol	22.34	24.79
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	24.37	20.13
GSMUA_Achr5P29080_001	Banana	mitochondrion	29.19	19.93
GSMUA_Achr2P16350_001	Banana	mitochondrion	27.92	19.75
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	27.41	18.82
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	28.93	18.72
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	29.19	18.28
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	26.65	18.01
GSMUA_Achr5P13850_001	Banana	nucleus	25.89	16.78
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	28.93	15.32

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr3G26820_001	EnsemblPlants:GSMUA_Achr3P26820_001	EnsemblPlants:GSMUA_Achr3T26820_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0SI48
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF237	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002958DEB

Description

Probable protein phosphatase 2C 60 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26820_001]

Coordinates

chr3:+:26521635..26530112

Molecular Weight (calculated)

43937.0 Da

IEP (calculated)

9.582

GRAVY (calculated)

-0.238

Length

394 amino acids

Sequence
(BLAST)

001: MFAKLMNLLK ACWRPSSHKY AHTGSDVVGW QDGLLWYKDS GQHVYGEFSM AVVQANNLLE DQSQIESGPL SSLEFGPYGT FVGVYDGHGG PETSRYVNDH
101: IFQHLKRFAT EQQLMSADVI RKAYQATEEG FTSLVTKQWP VKPQIAAVGT CCLVGVICGG MLHIANLGDS RVVLGRVVKA TGEVLAVQLS VEHNVGIESV
201: RRELQSMHPD DKQIVVMKHN VWRVKGLIQI SRSIGDVYLK KAEFNREPLH VKFRLREPFK KPILSSVPSI TVQPLQPQDQ FLIFASDGLW EHLNNQEAVN
301: IVQKNSHSGS ARRLVKAALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFLDSNLV SRANSLRGPS LSVRGGGINV PHKSLAPCTT PTEV

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.