Factsheet for Solyc01g111730.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046486	Potato	mitochondrion	99.23	99.23
Solyc10g055650.1.1	Tomato	cytosol	76.03	87.02
Solyc02g083420.2.1	Tomato	mitochondrion	79.64	79.23
GSMUA_Achr4P04870_001	Banana	cytosol	68.81	78.07
AT3G51370.1	Thale cress	cytosol, extracellular	75.26	77.04
Solyc03g033340.2.1	Tomato	mitochondrion	78.35	76.57
CDY16313	Canola	extracellular	73.71	75.86
GSMUA_Achr3P00610_001	Banana	cytosol	68.04	75.86
EER90402	Sorghum	mitochondrion	76.03	75.84
CDX73725	Canola	vacuole	73.45	75.6
Bra038895.1-P	Field mustard	plastid	73.71	74.87
CDY33283	Canola	plastid	73.71	74.87
AT5G66080.1	Thale cress	plastid	74.23	74.81
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	76.29	74.56
Os06t0717800-01	Rice	mitochondrion	75.26	74.49
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	68.3	74.23
GSMUA_Achr3P26820_001	Banana	mitochondrion	75.0	73.86
Bra010741.1-P	Field mustard	plastid	72.16	73.68
Zm00001d014797_P001	Maize	mitochondrion	74.74	73.6
CDX90277	Canola	cytosol, mitochondrion, nucleus	71.65	73.16
GSMUA_Achr5P11520_001	Banana	mitochondrion	74.48	72.98
CDY12086	Canola	cytosol, mitochondrion, nucleus	71.39	72.89
AT4G38520.1	Thale cress	mitochondrion	75.0	72.75
TraesCS7B01G455500.1	Wheat	mitochondrion	72.68	71.94
HORVU7Hr1G117970.1	Barley	mitochondrion	72.68	71.94
TraesCS7D01G524700.1	Wheat	mitochondrion	72.42	71.68
TraesCS7A01G537000.1	Wheat	mitochondrion	72.16	71.43
Os03t0137200-01	Rice	mitochondrion	73.2	71.18
GSMUA_Achr8P13120_001	Banana	cytosol	71.65	70.92
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	72.16	70.18
HORVU4Hr1G080570.1	Barley	mitochondrion	71.91	69.92
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	71.39	69.77
TraesCS5A01G505300.1	Wheat	mitochondrion	71.65	69.67
Zm00001d027571_P003	Maize	cytosol	71.65	69.67
TraesCS4D01G331100.1	Wheat	mitochondrion	71.65	69.67
EER94559	Sorghum	cytosol	70.36	69.47
TraesCS4B01G335500.1	Wheat	mitochondrion	71.39	69.25
Os10t0544900-01	Rice	plastid	69.85	68.96
EER95550	Sorghum	mitochondrion, peroxisome, plastid	70.88	68.92
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	70.36	68.59
CDY54807	Canola	nucleus, peroxisome, plastid	68.81	68.46
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	67.53	68.41
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	73.2	68.11
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	68.3	67.6
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	68.3	67.6
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	68.3	67.6
Solyc10g084410.1.1	Tomato	mitochondrion	65.21	67.29
GSMUA_Achr9P24110_001	Banana	cytosol	68.56	66.5
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	68.3	66.42
Solyc09g007080.2.1	Tomato	cytosol	63.92	65.61
CDY70696	Canola	extracellular, peroxisome	54.38	65.12
Solyc05g055980.2.1	Tomato	cytosol	51.8	64.01
CDY29015	Canola	cytosol	56.19	60.56
Bra036813.1-P	Field mustard	vacuole	72.42	56.31
CDX78002	Canola	vacuole	72.42	56.31
Zm00001d036395_P008	Maize	mitochondrion	74.23	54.14
Solyc06g065920.2.1	Tomato	nucleus	51.55	53.48
Solyc01g107300.2.1	Tomato	cytosol	30.67	51.97
Solyc02g092750.2.1	Tomato	cytosol	47.16	50.0
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	48.97	50.0
Solyc01g107310.2.1	Tomato	mitochondrion	21.91	45.95
Solyc10g078810.1.1	Tomato	cytosol	44.07	39.04
Solyc10g078820.1.1	Tomato	mitochondrion	45.36	38.26
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	21.65	26.5
Solyc10g086490.1.1	Tomato	cytosol	28.87	18.79
Solyc09g010780.2.1	Tomato	cytosol	28.61	17.82
Solyc06g076100.2.1	Tomato	nucleus	31.7	17.37
Solyc12g099600.1.1	Tomato	plasma membrane	24.74	16.7
Solyc08g007000.2.1	Tomato	nucleus	31.44	15.62
Solyc08g077150.2.1	Tomato	nucleus	30.41	14.82
Solyc10g078800.1.1	Tomato	mitochondrion	40.98	12.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4B435	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF237
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc01g111730.2	EnsemblPlants:Solyc01g111730.2.1	UniParc:UPI00027678E4	:

Description

No Description!

Coordinates

chr1:+:97916839..97922563

Molecular Weight (calculated)

42812.0 Da

IEP (calculated)

8.247

GRAVY (calculated)

-0.263

Length

388 amino acids

Sequence
(BLAST)

001: MTSGLMNFLR ACFQPGADGL VHTSSSDSGG RQDGLLWYKD TGQHVNGEFS MAVVQANNLL EDQSQIESGC LSMQDSGPYG TFIGIYDGHG GPETSRFINE
101: HLFQNLKRFT SEHQSMSVEV IRKAFQATEE GFLSVVTRQW PTKPQIAAVG SCCLVGVICS GTLYVANLGD SRAVLGRLVR STGEVLAIQL SAEHNVSIES
201: VRQEMQSLHP DDSQIVVLKH NVWRVKGLIQ ISRSIGDVYL KKSEFNREPL YAKFRLREPF GKPILSADPA ISVHHLQPDD QFIIFASDGL WEHLSNQGAV
301: DIVQNHPRNG IARRLVKTAL QEAAKKREMR YSDLKKIDRG VRRHFHDDIS VAVVFLDSNL VSRASSVKSP NISVKGGGIS LPTKTTPT

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.