Factsheet for TraesCS1D01G208600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	99.23	99.23
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	98.21	98.21
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	97.7	95.99
Os10t0544900-01	Rice	plastid	87.5	87.28
EER94559	Sorghum	cytosol	83.93	83.72
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	84.18	82.91
TraesCS4D01G331100.1	Wheat	mitochondrion	77.55	76.19
Solyc10g055650.1.1	Tomato	cytosol	63.01	72.86
PGSC0003DMT400068706	Potato	mitochondrion	69.13	70.76
VIT_03s0038g02650.t01	Wine grape	mitochondrion	70.66	69.77
CDY16313	Canola	extracellular	66.84	69.5
PGSC0003DMT400009248	Potato	mitochondrion	68.88	69.23
CDX90277	Canola	cytosol, mitochondrion, nucleus	66.84	68.95
CDY12086	Canola	cytosol, mitochondrion, nucleus	66.58	68.68
Bra038895.1-P	Field mustard	plastid	66.84	68.59
CDY33283	Canola	plastid	66.84	68.59
Solyc02g083420.2.1	Tomato	mitochondrion	68.11	68.46
Bra010741.1-P	Field mustard	plastid	66.33	68.42
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	67.6	68.3
PGSC0003DMT400046486	Potato	mitochondrion	67.6	68.3
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	69.13	68.26
KRH36089	Soybean	cytosol	68.88	68.01
TraesCS7D01G524700.1	Wheat	mitochondrion	67.86	67.86
AT3G51370.1	Thale cress	cytosol, extracellular	65.56	67.81
KRG90665	Soybean	mitochondrion	68.62	67.76
PGSC0003DMT400058098	Potato	mitochondrion	68.62	67.76
KRH69725	Soybean	mitochondrion	67.86	67.51
KRH07984	Soybean	mitochondrion	67.86	67.51
Solyc03g033340.2.1	Tomato	mitochondrion	68.37	67.51
CDX73725	Canola	vacuole	64.8	67.37
AT5G66080.1	Thale cress	plastid	66.07	67.27
AT4G38520.1	Thale cress	mitochondrion	68.37	67.0
CDY54807	Canola	nucleus, peroxisome, plastid	66.58	66.92
CDY70696	Canola	extracellular, peroxisome	53.83	65.12
VIT_00s0434g00020.t01	Wine grape	cytosol	64.03	61.52
TraesCS3D01G544100.1	Wheat	mitochondrion	59.69	60.62
CDY29015	Canola	cytosol	49.23	53.61
TraesCS2D01G456600.2	Wheat	mitochondrion	51.79	52.05
Bra036813.1-P	Field mustard	vacuole	65.05	51.1
CDX78002	Canola	vacuole	65.05	51.1
TraesCS5D01G510100.1	Wheat	plastid	48.21	49.09
TraesCS5D01G408500.1	Wheat	mitochondrion	45.15	47.58
TraesCS5D01G085200.1	Wheat	mitochondrion	46.43	47.52
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	44.64	44.99
TraesCS2D01G288400.1	Wheat	nucleus	25.51	18.35
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	27.3	17.92
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	27.04	17.52
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	26.53	16.3

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF324	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS1D01G208600
EnsemblPlants:TraesCS1D01G208600.1	TIGR:cd00143	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:294739019..294742288

Molecular Weight (calculated)

43367.9 Da

IEP (calculated)

8.245

GRAVY (calculated)

-0.228

Length

392 amino acids

Sequence
(BLAST)

001: MLLSTMDYLR SCWGPTSSPD GRPRKGVDAA GRQDGLLWYK DAGQLVAGEF SMAVVQANNL LEDHSQVESG SLSTTDPDLQ GTFVGVYDGH GGPETARYIN
101: DHMFNHLKGY ASEQKCMSVE VIRKAFRATE EGFLSLVSNQ WSVRPQLAAV GSCCLVGVIC AGTLYVANVG DSRAILGRLV KGTGEVVAMQ LSAEHNASFE
201: EVRREMQAMH PDDPHIVILK HNVWRVKGII QITRSIGDVY LKRPEFNREP LHSKFRLPET FRRPLLSSEP AITVHQIQLT DQFIIFASDG LWEHLSNQKA
301: VELVHSSPRN GIARKLVKAA MQEAAKKREM RYSDLKKIDR GVRRHFHDDI TVVVVFFDSN AIAMDAWSRP TVSLRGGGVA LPANSLAPFS GS

Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.