Factsheet for TraesCS5D01G493200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	96.55	98.25
TraesCS5A01G479600.1	Wheat	plastid	97.81	97.65
HORVU5Hr1G113240.1	Barley	plastid	97.65	97.34
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	84.95	84.82
EER90623	Sorghum	plastid	84.01	84.54
Zm00001d012962_P001	Maize	mitochondrion	81.97	82.75
Zm00001d034655_P001	Maize	peroxisome	79.0	81.95
CDY40354	Canola	cytosol	26.96	71.37
GSMUA_Achr5P29080_001	Banana	mitochondrion	58.31	64.47
GSMUA_Achr2P16350_001	Banana	mitochondrion	55.96	64.09
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	57.37	60.1
CDY71703	Canola	cytosol	17.4	55.5
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	49.37	52.5
Solyc10g086490.1.1	Tomato	cytosol	48.9	52.35
CDY62569	Canola	nucleus	49.22	51.14
Solyc09g010780.2.1	Tomato	cytosol	48.9	50.08
CDY44706	Canola	nucleus	46.08	49.66
CDY41610	Canola	nucleus	46.08	49.49
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	50.0	49.08
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	48.43	48.97
AT5G02400.1	Thale cress	nucleus	51.1	48.37
Bra029766.1-P	Field mustard	nucleus	46.71	46.27
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	42.63	45.56
CDY07928	Canola	nucleus	47.02	45.32
CDX73980	Canola	nucleus	46.71	44.74
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	41.54	44.39
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	41.69	44.19
Bra001308.1-P	Field mustard	nucleus	46.87	43.71
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	38.71	40.83
Bra009593.1-P	Field mustard	nucleus	51.41	40.8
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	19.59	36.76
TraesCS2D01G288400.1	Wheat	nucleus	25.55	29.91
TraesCS3D01G544100.1	Wheat	mitochondrion	18.03	29.79
TraesCS7D01G524700.1	Wheat	mitochondrion	17.71	28.83
TraesCS4D01G331100.1	Wheat	mitochondrion	16.77	26.82
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	16.3	26.53
TraesCS5D01G408500.1	Wheat	mitochondrion	15.36	26.34
TraesCS5D01G510100.1	Wheat	plastid	15.36	25.45
TraesCS2D01G456600.2	Wheat	mitochondrion	15.52	25.38
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	15.36	25.19
TraesCS5D01G085200.1	Wheat	mitochondrion	14.73	24.54

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5D01G493200	EnsemblPlants:TraesCS5D01G493200.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:525982882..525986059

Molecular Weight (calculated)

68598.6 Da

IEP (calculated)

5.609

GRAVY (calculated)

-0.305

Length

638 amino acids

Sequence
(BLAST)

001: MGNSLACFCC AGAGGVGAAK SRRRHVAPAA LPSDPAYDEG LGHSFCYVRP DKLPPAHCYY PAADDGDLLL PDAKAAAEEA TTFRAISGAA LSANVSTPLS
101: TSALLLLPAD DSTASSGFES SDSFAAVPLQ PVPRFPSGPI SSAPFSGGFL SGPIERGFLS GPLDAGLLSG PLPGAVASGR MGGAGGAVPA LRRSLSHGGR
201: RIRDFTRALL ARTDRFQGHP DLGSPDAAAA VAACGGDSNG LQWAQGKAGE DRVHVVVSEE RGWVFVGIYD GFNGPDATDF LVSNLYAAVH RELRGLLWEQ
301: SQEDQPGSAP STTAPDHQDQ CTRRRRARRS RPPRSGSGSV DDNDQRQWRC EWERDCSSLK PPTQPPPRSN GENDHIAVLK ALARALRKTE DAYLGIADKM
401: VGEFPELALM GSCVLSMLMK GEDMYVMGVG DSRAVLATMD SVDLEHISEG SFDGLSPCLS AVQLTSDHST SMPEEVRRIR NEHPDDPSAI SKDRVKGSLK
501: VTRAFGAGFL KQPKWNDALL EMFRIDYVGS SPYITCNPSL FHHKLSTRDR FLILSSDGLY QYFTNEEAVA EVEMFIATTP EGDPAQHLVE EVLFRAANKA
601: GMDFHELIEI PQGDRRRYHD DVSVIVISLE GRIWRSCV

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.