Factsheet for TraesCS5A01G479600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G113240.1	Barley	plastid	97.97	97.81
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	97.65	97.81
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	95.93	97.77
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	84.66	84.66
EER90623	Sorghum	plastid	83.88	84.54
Zm00001d012962_P001	Maize	mitochondrion	81.85	82.75
Zm00001d034655_P001	Maize	peroxisome	78.87	81.95
CDY40354	Canola	cytosol	26.6	70.54
GSMUA_Achr2P16350_001	Banana	mitochondrion	56.02	64.27
GSMUA_Achr5P29080_001	Banana	mitochondrion	57.9	64.12
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	57.43	60.26
CDY71703	Canola	cytosol	17.06	54.5
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	49.45	52.67
Solyc10g086490.1.1	Tomato	cytosol	48.83	52.35
CDY62569	Canola	nucleus	48.83	50.81
Solyc09g010780.2.1	Tomato	cytosol	48.67	49.92
CDY44706	Canola	nucleus	45.85	49.49
CDY41610	Canola	nucleus	45.85	49.33
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	49.77	48.92
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	48.2	48.81
AT5G02400.1	Thale cress	nucleus	50.55	47.92
Bra029766.1-P	Field mustard	nucleus	46.48	46.12
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	42.57	45.56
CDY07928	Canola	nucleus	46.64	45.02
CDX73980	Canola	nucleus	46.32	44.44
TraesCS6A01G263600.1	Wheat	plastid	41.47	44.39
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	41.63	44.19
Bra001308.1-P	Field mustard	nucleus	46.48	43.42
TraesCS1A01G033700.1	Wheat	mitochondrion	38.97	41.64
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	38.65	40.62
Bra009593.1-P	Field mustard	nucleus	50.86	40.42
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	19.56	36.76
TraesCS2A01G290500.1	Wheat	nucleus	25.35	31.21
TraesCS3A01G538500.1	Wheat	mitochondrion	18.0	29.79
TraesCS7A01G537000.1	Wheat	mitochondrion	17.53	28.57
TraesCS7A01G386400.1	Wheat	cytosol	6.26	28.57
TraesCS5A01G505300.1	Wheat	mitochondrion	16.74	26.82
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	16.28	26.53
TraesCS4A01G363400.1	Wheat	mitochondrion	15.49	25.98
TraesCS5A01G398900.1	Wheat	mitochondrion	15.18	25.53
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	15.18	24.87
TraesCS5A01G072500.1	Wheat	mitochondrion	14.87	24.8
TraesCS5A01G478600.1	Wheat	cytosol	12.83	23.3
TraesCS4A01G050000.1	Wheat	plastid	15.02	22.43

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5A01G479600	EnsemblPlants:TraesCS5A01G479600.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:652999095..653002337

Molecular Weight (calculated)

68728.8 Da

IEP (calculated)

5.728

GRAVY (calculated)

-0.295

Length

639 amino acids

Sequence
(BLAST)

001: MGNSIACFCC AGGGVGAVGG AKSRRRHVAP AALPSDPAYD EGLGHSFCYV RPDKLPPAHF YYPAADDGDL LVPDAKAAAE EATTFRAISG AALSANVSTP
101: LSTSALLLLP DDSTASSGFE SSESFAAVPL QPVPRFPSGP ISSAPFSGGF LSGPIERGFL SGPLDAALLS GPLPGAVASG RMAGGGGAVP ALRRSLSHGG
201: RRIRDFTRAL LARTDRFQGH PDLGSPDAAA AVAACGGDSN GLQWAQGKAG EDRVHVVVSE ERGWVFVGIY DGFNGPDATD FLVSNLYAAV HRELRGLLWE
301: QSQEDQPGSA PSTTAPDHQD QCTRRRRARR SRPPRSGSGS VDDNDQRQWR CEWERDCSSL KPATQPPPRS NGENDHIAVL KALARALRKT EDAYLGIADK
401: MVGEFPELAL MGSCVLSMLM KGEDMYVMGV GDSRAVLATM DSVDLEHISE GSFDGLSPCL SAVQLTSDHS TSMPEEVRRI RNEHPDDPSA ISKDRVKGSL
501: KVTRAFGAGF LKQPKWNDAL LEMFRIDYVG SSPYITCNPS LFHHRLSTRD RFLILSSDGL YQYFTNEEAV AQVEMFIATT PEGDPAQHLV EEVLFRAANK
601: AGMDFHELIE IPQGDRRRYH DDVSVIVISL EGRIWRSCV

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.