Factsheet for GSMUA_Achr5P29080_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40354	Canola	cytosol	29.81	71.37
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	74.35	70.44
GSMUA_Achr2P16350_001	Banana	mitochondrion	67.76	70.2
EER90623	Sorghum	plastid	65.16	59.31
Zm00001d034655_P001	Maize	peroxisome	62.91	59.02
Zm00001d012962_P001	Maize	mitochondrion	64.64	59.02
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	65.16	58.84
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	63.6	58.53
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	64.47	58.31
TraesCS5A01G479600.1	Wheat	plastid	64.12	57.9
HORVU5Hr1G113240.1	Barley	plastid	63.95	57.66
CDY71703	Canola	cytosol	19.06	55.0
Solyc10g086490.1.1	Tomato	cytosol	55.98	54.19
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	56.15	54.0
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	53.55	53.83
Solyc09g010780.2.1	Tomato	cytosol	58.06	53.77
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	53.21	52.66
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	56.67	51.82
CDY62569	Canola	nucleus	53.73	50.49
CDY44706	Canola	nucleus	49.74	48.48
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	54.59	48.46
CDY41610	Canola	nucleus	49.74	48.32
AT5G02400.1	Thale cress	nucleus	54.42	46.59
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	48.01	46.4
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	49.91	45.79
Bra029766.1-P	Field mustard	nucleus	50.95	45.65
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	47.49	45.51
GSMUA_Achr5P13850_001	Banana	nucleus	47.66	45.23
CDY07928	Canola	nucleus	51.13	44.56
CDX73980	Canola	nucleus	50.95	44.14
Bra001308.1-P	Field mustard	nucleus	51.13	43.13
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	24.26	41.18
Bra009593.1-P	Field mustard	nucleus	55.63	39.93
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	50.61	39.25
GSMUA_Achr10P...	Banana	cytosol	23.92	38.87
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	28.08	33.96
GSMUA_Achr4P04870_001	Banana	cytosol	19.58	33.04
GSMUA_Achr6P23480_001	Banana	cytosol	19.06	32.93
GSMUA_Achr6P15470_001	Banana	mitochondrion	20.62	31.4
GSMUA_Achr10P...	Banana	cytosol	20.28	31.12
GSMUA_Achr3P00610_001	Banana	cytosol	18.72	31.03
GSMUA_Achr11P...	Banana	mitochondrion	19.58	29.89
GSMUA_Achr8P13470_001	Banana	mitochondrion	19.76	29.84
GSMUA_Achr6P11170_001	Banana	cytosol	19.41	29.79
GSMUA_Achr2P02070_001	Banana	mitochondrion	19.06	29.57
GSMUA_Achr3P02220_001	Banana	mitochondrion	19.24	29.52
GSMUA_Achr5P11520_001	Banana	mitochondrion	20.1	29.29
GSMUA_Achr3P26820_001	Banana	mitochondrion	19.93	29.19
GSMUA_Achr2P21550_001	Banana	mitochondrion	19.41	29.02
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	19.24	28.98
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	19.93	28.97
GSMUA_Achr8P13120_001	Banana	cytosol	19.24	28.32
GSMUA_Achr9P24110_001	Banana	cytosol	19.41	28.0
GSMUA_Achr4P14220_001	Banana	mitochondrion	17.5	27.08

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G29080_001	EnsemblPlants:GSMUA_Achr5P29080_001	EnsemblPlants:GSMUA_Achr5T29080_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0T2N2	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294862D
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G29080_001]

Coordinates

chr5:+:28968895..28971413

Molecular Weight (calculated)

63707.1 Da

IEP (calculated)

5.726

GRAVY (calculated)

-0.366

Length

577 amino acids

Sequence
(BLAST)

001: MGNGLARLAY CCPGDGAPTG RRRRRHGAVA VTWDPCDEGL GHSFCYVRRD TECGETTTFR TISGAAVSAN ASTPLSTSLL DVAGPIAASA FESSTSFSSV
101: ALQPVPRFSG PLSGPLAAAD RGFMSGPIER GFMSGPLDHR ASLFSAPLDK PLCFSDQLRR SLSHGLPRPR RMAVRSLIRG LTKAAAQWSD SLDSLNGNLQ
201: WAQGKAGEDR VHVVVSEEHG WVFVGIYDGF NGPDATDYLL SNLYPAVHRE LKGLLWEDKN DTFCREPVDD PTTPAAPDEH NPTVATNWAA DDRCEFERER
301: LELDRRLKEQ SKRSSQDRSV NHSLVLEALS EALRKTEESF LDIADKMVSE NPELALMGSC VLVMLMKGDD VYLMNVGDSR AIVARKAEPD SWSSPTNLVA
401: LQLNSDHSTS VEEEVGRIRD EHPDDSSAIW NDRVKGSLKV TRAFGAGFLK QPKWNDGLLE MFRIEYVGST PYITCNPSLH HHKLGPKDAF LILSSDGLYQ
501: YFTNQEAVAQ VQMFVAATPE GDPAQHLVEQ VLFRAAKKAG MDFHELLEIP QGDRRRYHDD ICVIIISLEG RIWRSCM

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.