Factsheet for GSMUA_Achr9P03940_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	77.35	76.16
CDY40354	Canola	cytosol	26.31	62.66
GSMUA_Achr2P16350_001	Banana	mitochondrion	54.53	56.19
GSMUA_Achr5P29080_001	Banana	mitochondrion	53.83	53.55
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	55.75	52.55
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	51.74	49.5
CDY71703	Canola	cytosol	17.07	49.0
Solyc10g086490.1.1	Tomato	cytosol	50.17	48.32
Solyc09g010780.2.1	Tomato	cytosol	51.39	47.35
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	51.05	46.43
CDY62569	Canola	nucleus	48.26	45.11
CDY44706	Canola	nucleus	45.82	44.43
CDY41610	Canola	nucleus	45.82	44.28
GSMUA_Achr5P13850_001	Banana	nucleus	45.47	42.93
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	44.43	42.71
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	46.69	42.61
AT5G02400.1	Thale cress	nucleus	49.13	41.84
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	43.38	41.36
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	46.52	41.08
Bra029766.1-P	Field mustard	nucleus	45.82	40.84
CDY07928	Canola	nucleus	45.47	39.43
CDX73980	Canola	nucleus	45.3	39.04
Bra001308.1-P	Field mustard	nucleus	45.64	38.3
GSMUA_Achr10P...	Banana	cytosol	23.0	37.18
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	48.08	37.1
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	21.43	36.18
Bra009593.1-P	Field mustard	nucleus	49.48	35.32
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	28.22	33.96
GSMUA_Achr6P23480_001	Banana	cytosol	18.82	32.34
GSMUA_Achr6P15470_001	Banana	mitochondrion	20.73	31.4
GSMUA_Achr4P04870_001	Banana	cytosol	18.12	30.41
GSMUA_Achr10P...	Banana	cytosol	19.51	29.79
GSMUA_Achr8P13470_001	Banana	mitochondrion	19.69	29.58
GSMUA_Achr3P00610_001	Banana	cytosol	17.77	29.31
GSMUA_Achr6P11170_001	Banana	cytosol	18.64	28.46
GSMUA_Achr3P02220_001	Banana	mitochondrion	18.64	28.46
GSMUA_Achr5P11520_001	Banana	mitochondrion	19.16	27.78
GSMUA_Achr8P13120_001	Banana	cytosol	18.82	27.55
GSMUA_Achr2P21550_001	Banana	mitochondrion	18.47	27.46
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	18.29	27.42
GSMUA_Achr3P26820_001	Banana	mitochondrion	18.82	27.41
GSMUA_Achr2P02070_001	Banana	mitochondrion	17.42	26.88
GSMUA_Achr11P...	Banana	mitochondrion	17.6	26.72
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	18.47	26.7
GSMUA_Achr9P24110_001	Banana	cytosol	18.47	26.5
GSMUA_Achr4P14220_001	Banana	mitochondrion	16.9	26.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G03940_001	EnsemblPlants:GSMUA_Achr9P03940_001	EnsemblPlants:GSMUA_Achr9T03940_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0TXA3	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294A6B1
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 23 [Source:GMGC_GENE;Acc:GSMUA_Achr9G03940_001]

Coordinates

chr9:+:2670529..2672706

Molecular Weight (calculated)

62807.4 Da

IEP (calculated)

5.780

GRAVY (calculated)

-0.395

Length

574 amino acids

Sequence
(BLAST)

001: MGNGLVKLAP CFSGDDRPVG DAAAESSETV DEGLGHSFFY VRPDGGPHLA RSGSNGSSSS SARVHHSDEA AAASTTTFRS ISGAAVSANA ATPLSTAPLM
101: FRNELTCSSA ASFESSSSFA SVSLQPRHSG SLSGPIGSDR HYFGSGPLDR GFHSGPLEHH RASVYLSRTV TKFRCIATPA KPSEKPSGAK TSFDCLGDES
201: DLSDAANGNL HWAQGKAGED RTHVVVSEEH GWVFVGIYDG FNGPDATDYL LVNLYPAIHR ELKGLLWDDP QNGCEHAIDT SQELDDDCRR SSGGGIDHRA
301: VLKALSRALR RTEEAYLRMA NTMVSANPEL ALMGSCVLAM LVRGEDVYLM NVGDSRAVLG RRAEPDLWNL VGQATQDLEV MRNETLRYLE SYDELVALQL
401: TLDHTTFNNE EVRRIRTQHP DDPAAIANNR VKGSLKVTRA FGAGYLKQPK WNNALLGAFR IDYKGTSPYI NCNPFLCYHR LGPKDKYLIL SSDGLYQYFT
501: NEEVVTQVEM FVATNPDSDP ARYLVEEVLH RAADKAGMDF DQLLDVPQGD RRRYHDDVSV ILISMEGRMW RSCL

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.