Factsheet for GSMUA_Achr3P02220_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P10530_001
GSMUA_Achr5P24150_001
GSMUA_Achr6P03720_001
GSMUA_Achr9P19570_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	GSMUA_Achr1P10530_001	AT2G24400.1	21798944
AT4G33920.1	GSMUA_Achr5P24150_001	AT2G24400.1	21798944
AT4G33920.1	GSMUA_Achr6P03720_001	AT2G24400.1	21798944
AT4G33920.1	GSMUA_Achr9P19570_001	AT2G24400.1	21798944
AT4G33920.1	GSMUA_Achr11P...	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11170_001	Banana	cytosol	81.91	81.91
GSMUA_Achr2P21550_001	Banana	mitochondrion	79.52	77.46
VIT_03s0091g00470.t01	Wine grape	mitochondrion	72.61	71.65
VIT_07s0129g00520.t01	Wine grape	cytosol	72.61	71.09
GSMUA_Achr4P14220_001	Banana	mitochondrion	70.21	70.78
Solyc01g107300.2.1	Tomato	cytosol	42.82	70.31
KRG91074	Soybean	cytosol, mitochondrion	68.88	69.44
KRH35699	Soybean	mitochondrion	69.68	69.31
PGSC0003DMT400066175	Potato	cytosol	68.35	68.53
VIT_18s0001g09390.t01	Wine grape	mitochondrion	68.88	68.52
Os12t0580900-01	Rice	mitochondrion	71.01	68.11
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	65.96	66.85
KRH77072	Soybean	cytosol	66.22	66.05
KRH28403	Soybean	cytosol	65.69	65.87
TraesCS5B01G078500.1	Wheat	mitochondrion	66.49	65.27
HORVU5Hr1G018930.2	Barley	mitochondrion	66.22	65.01
Bra036972.1-P	Field mustard	mitochondrion	64.63	64.97
TraesCS5D01G085200.1	Wheat	mitochondrion	65.96	64.75
Solyc02g092750.2.1	Tomato	cytosol	62.77	64.48
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	65.16	64.47
CDY49385	Canola	mitochondrion	64.1	64.44
CDX72438	Canola	mitochondrion	63.83	64.17
PGSC0003DMT400064207	Potato	cytosol	63.3	63.98
TraesCS5A01G072500.1	Wheat	mitochondrion	65.16	63.97
AT4G33920.1	Thale cress	mitochondrion	64.1	63.42
Bra034592.1-P	Field mustard	mitochondrion	64.36	62.86
CDY28332	Canola	mitochondrion	64.1	62.76
CDY51944	Canola	mitochondrion	64.1	62.6
Solyc01g107310.2.1	Tomato	mitochondrion	29.52	60.0
GSMUA_Achr8P13470_001	Banana	mitochondrion	52.13	51.31
GSMUA_Achr6P23480_001	Banana	cytosol	44.95	50.6
GSMUA_Achr4P04870_001	Banana	cytosol	46.01	50.58
GSMUA_Achr10P...	Banana	cytosol	50.0	50.0
GSMUA_Achr11P...	Banana	mitochondrion	50.27	50.0
GSMUA_Achr6P15470_001	Banana	mitochondrion	49.47	49.08
GSMUA_Achr5P11520_001	Banana	mitochondrion	51.33	48.74
GSMUA_Achr3P00610_001	Banana	cytosol	44.95	48.56
GSMUA_Achr2P02070_001	Banana	mitochondrion	47.07	47.58
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	49.2	46.6
GSMUA_Achr3P26820_001	Banana	mitochondrion	48.67	46.45
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	45.48	44.65
GSMUA_Achr8P13120_001	Banana	cytosol	46.54	44.64
GSMUA_Achr9P24110_001	Banana	cytosol	44.95	42.25
GSMUA_Achr10P...	Banana	cytosol	26.86	28.45
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	27.39	21.59
GSMUA_Achr5P29080_001	Banana	mitochondrion	29.52	19.24
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	28.46	18.64
GSMUA_Achr5P13850_001	Banana	nucleus	29.79	18.42
GSMUA_Achr2P16350_001	Banana	mitochondrion	27.13	18.31
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	30.59	18.28
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	29.26	18.06
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	26.6	17.15
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	29.52	14.92

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr3G02220_001	EnsemblPlants:GSMUA_Achr3P02220_001	EnsemblPlants:GSMUA_Achr3T02220_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0SB40
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF362	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00029526BE

Description

Probable protein phosphatase 2C 78 [Source:GMGC_GENE;Acc:GSMUA_Achr3G02220_001]

Coordinates

chr3:+:1465498..1468263

Molecular Weight (calculated)

41990.0 Da

IEP (calculated)

7.927

GRAVY (calculated)

-0.300

Length

376 amino acids

Sequence
(BLAST)

001: MLRSCLRPLE RCSGRLGGGD GLLWHMDLKP HASGEFSIAV AQANVSLEDQ GQVFASPSAT YIGVYDGHGG PEASRFISNR LFSHLDRFAS EQGGLSSEVI
101: KRAFDATEEE FLYLVKRSWR LRPQMASVGS CCLIGAITDD RLYVANLGDS RAVLGRCSLG GRAVVAERLS TDHNVSMEEV RKEVAANHPD DKQIIVHTRG
201: AWRIKGIIQV SRSIGDVYLK KPEFSSDPLF QQFVSPVPLE RPVITAEPSI RVHKLKPHDL FFIFASDGLW EQLSDEAAVK IVFKNPRAGI AKRLVRAALI
301: EAARKQGMSY DDLKHIEKGI RRRVHDDITV VVIYIDQHHQ GGHSRFNRSN RDCTSAPVDI FSFNFDESED PLRRAE

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.