Factsheet for GSMUA_Achr1P10530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P23000_001
GSMUA_Achr5P26360_001
GSMUA_Achr7P27110_001
GSMUA_Achr8P01460_001
GSMUA_Achr9P30020_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24400.1	GSMUA_Achr3P23000_001	AT4G27280.1	21798944
AT2G24400.1	GSMUA_Achr5P26360_001	AT4G27280.1	21798944
AT2G24400.1	GSMUA_Achr7P27110_001	AT4G27280.1	21798944
AT2G24400.1	GSMUA_Achr8P01460_001	AT4G27280.1	21798944
AT2G24400.1	GSMUA_Achr9P30020_001	AT4G27280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19570_001	Banana	cytosol, plastid	70.4	72.13
GSMUA_Achr4P05740_001	Banana	cytosol, plastid	76.8	62.75
GSMUA_Achr4P12510_001	Banana	cytosol	38.4	59.26
KRH46980	Soybean	cytosol	65.6	57.75
KRH44681	Soybean	plastid	67.2	54.19
GSMUA_Achr6P03720_001	Banana	cytosol	64.0	53.33
GSMUA_Achr5P24150_001	Banana	mitochondrion	50.4	52.5
VIT_04s0008g02800.t01	Wine grape	plastid	66.4	51.23
VIT_09s0054g00660.t01	Wine grape	cytosol, plastid	69.6	50.29
VIT_09s0054g00740.t01	Wine grape	cytosol, plastid	68.8	48.59
KRH16185	Soybean	nucleus	67.2	47.46
KRH52631	Soybean	plastid	64.8	47.37
KRH04818	Soybean	cytosol	63.2	45.66
KRH61972	Soybean	plastid	61.6	45.03
AT2G24400.1	Thale cress	cytosol, mitochondrion, nucleus	64.0	44.94
CDY20311	Canola	cytosol, mitochondrion, nucleus	60.8	43.43
AT4G31320.1	Thale cress	cytosol	65.6	43.39
CDY46148	Canola	cytosol, mitochondrion, nucleus	60.8	43.18
CDY36449	Canola	cytosol, nucleus, plastid	62.4	42.86
Bra032097.1-P	Field mustard	cytosol, mitochondrion, nucleus	60.0	42.37
PGSC0003DMT400023703	Potato	nucleus	58.4	41.71
CDY13423	Canola	nucleus	58.4	41.01
CDX68733	Canola	nucleus	60.8	40.43
CDY28255	Canola	nucleus	60.8	40.43
Bra011258.1-P	Field mustard	nucleus	60.8	40.43
Bra024013.1-P	Field mustard	nucleus	60.8	40.0
Solyc03g124020.1.1	Tomato	nucleus	59.2	39.36
CDX72302	Canola	nucleus	60.8	36.36
GSMUA_Achr7P19840_001	Banana	cytosol	40.8	33.12
GSMUA_Achr6P31030_001	Banana	cytosol, mitochondrion	40.8	33.12
GSMUA_Achr5P22090_001	Banana	cytosol	39.2	31.82
GSMUA_Achr3P05530_001	Banana	mitochondrion	31.2	26.17
GSMUA_Achr5P24140_001	Banana	extracellular, plastid	32.0	26.14
GSMUA_Achr9P14000_001	Banana	mitochondrion	30.4	24.2
GSMUA_Achr7P19700_001	Banana	mitochondrion	27.2	22.82

Protein Annotations

EnsemblPlants:GSMUA_Achr1P10530_001	EnsemblPlants:GSMUA_Achr1T10530_001	EnsemblPlantsGene:GSMUA_Achr1G10530_001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF59	PFAM:PF02519	SEG:seg	UniParc:UPI000296CB7A
UniProt:M0RYR2	MapMan:35.2	:	:	:	:

Description

Putative Indole-3-acetic acid-induced protein ARG7 [Source:GMGC_GENE;Acc:GSMUA_Achr1G10530_001]

Coordinates

chr1:+:7953094..7953471

Molecular Weight (calculated)

14057.0 Da

IEP (calculated)

7.940

GRAVY (calculated)

-0.210

Length

125 amino acids

Sequence
(BLAST)

001: MDSSNKTNKI TEVVRLQQML KKWKKLAAAP KSNSKSIKFL KRTLSVSDTS AAHSGDIPKG CLAVCVGEEM QRFVIPTEYL SHRAFAILLR EAEEEFGFEQ
101: EGVLRIPCEV SVFESILQTV ETNYC

Best Arabidopsis Sequence Match ( AT2G24400.1 )
(BLAST)

001: MEAKKSNKIR EIVKLQQLLK KWRKQAIASK AANNNNEDNN SSGGGSKSIK FLKRTLSFTD VTAVPKGYLA VSVGLEKKRY TIPTEYLSHQ AFYVLLREAE
101: EEFGFQQAGV LRIPCEVSVF ESILKIMEEK NEGYLVTPIT AKQECKFNAA ADDKTSYQHP SDCPKTPSHQ PHNSPMCR

Arabidopsis Description

At2g24400 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ28]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.