Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g00740.t01 | Wine grape | cytosol, plastid | 96.53 | 94.35 |
| KRH46980 | Soybean | cytosol | 57.8 | 70.42 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 50.29 | 69.6 |
| KRH44681 | Soybean | plastid | 61.27 | 68.39 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 58.96 | 62.96 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 43.35 | 61.48 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 52.6 | 60.67 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 41.62 | 60.0 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 41.62 | 58.06 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 40.46 | 56.0 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 39.88 | 53.91 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 40.46 | 53.85 |
| Zm00001d002374_P001 | Maize | nucleus | 51.45 | 53.29 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 39.31 | 53.12 |
| OQU82277 | Sorghum | nucleus | 52.02 | 52.63 |
| Zm00001d026262_P001 | Maize | cytosol | 50.87 | 52.07 |
| Os04t0608300-01 | Rice | cytosol | 52.02 | 51.14 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 39.31 | 50.75 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 39.31 | 50.0 |
| Zm00001d053884_P001 | Maize | cytosol | 38.15 | 50.0 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 39.31 | 49.63 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 50.29 | 48.88 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 50.29 | 48.6 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 50.29 | 47.8 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 49.71 | 47.51 |
| PGSC0003DMT400023703 | Potato | nucleus | 47.4 | 46.86 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 39.31 | 46.26 |
| OQU76999 | Sorghum | cytosol | 38.15 | 45.52 |
| Solyc03g124020.1.1 | Tomato | nucleus | 49.13 | 45.21 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 38.73 | 35.08 |
| Os06t0701900-00 | Rice | mitochondrion | 38.73 | 34.18 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 30.64 | 32.52 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 25.43 | 32.12 |
| VIT_11s0078g00400.t01 | Wine grape | plastid | 28.32 | 30.06 |
| VIT_09s0054g00680.t01 | Wine grape | mitochondrion | 27.75 | 29.27 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 23.7 | 29.08 |
| VIT_08s0007g03120.t01 | Wine grape | mitochondrion | 20.81 | 28.8 |
Protein Annotations
| ArrayExpress:VIT_09s0054g00660 | EMBL:FN594972 | EnsemblPlants:VIT_09s0054g00660.t01 | EnsemblPlantsGene:VIT_09s0054g00660 | EntrezGene:100265117 | EntrezGene:LOC100265117 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF6 |
| PFAM:PF02519 | ProteinID:CCB45061 | ProteinID:CCB45061.1 | RefSeq:XP_002266327 | RefSeq:XP_002266327.1 | SEG:seg |
| UniParc:UPI0001984008 | UniProt:F6GYM5 | wikigene:100265117 | wikigene:LOC100265117 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr9:+:21457322..21457844
Molecular Weight (calculated)
19414.4 Da
IEP (calculated)
8.610
GRAVY (calculated)
-0.379
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKKSNKIS EIVRLQQILK KWKKLANAPR NSNKNGSHSS TSSSSNNGSK SIKFLKKTLS FTDTSSMLST EVVPKGFLAV CVGKELKRFI IPTEYLGHQA
101: FGVLLREAEE EFGFQQEGVL KIPCEVAVFE KILEVVEEKR DHVFFLNAEK EMIGCCSSSD CELTPSHHPQ MCR
101: FGVLLREAEE EFGFQQEGVL KIPCEVAVFE KILEVVEEKR DHVFFLNAEK EMIGCCSSSD CELTPSHHPQ MCR
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.