Factsheet for VIT_09s0054g00680.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0078g00400.t01	Wine grape	plastid	55.49	55.83
Solyc07g014620.1.1	Tomato	mitochondrion	45.73	50.0
PGSC0003DMT400035602	Potato	mitochondrion, plastid	47.56	46.99
PGSC0003DMT400053349	Potato	mitochondrion, plastid	45.73	45.45
GSMUA_Achr3P05530_001	Banana	mitochondrion	40.24	44.3
GSMUA_Achr9P14000_001	Banana	mitochondrion	41.46	43.31
Solyc05g046320.1.1	Tomato	plastid	45.12	43.02
GSMUA_Achr7P19700_001	Banana	mitochondrion	38.41	42.28
VIT_08s0007g03120.t01	Wine grape	mitochondrion	22.56	29.6
VIT_09s0054g00660.t01	Wine grape	cytosol, plastid	29.27	27.75
VIT_11s0016g00520.t01	Wine grape	cytosol	26.83	26.99
VIT_09s0054g00740.t01	Wine grape	cytosol, plastid	28.66	26.55
VIT_04s0008g02800.t01	Wine grape	plastid	26.22	26.54
VIT_09s0054g00730.t01	Wine grape	mitochondrion	20.73	24.82
VIT_09s0054g00670.t01	Wine grape	mitochondrion	20.73	24.11

Protein Annotations

ArrayExpress:VIT_09s0054g00680	EMBL:FN594972	EnsemblPlants:VIT_09s0054g00680.t01	EnsemblPlantsGene:VIT_09s0054g00680	EntrezGene:100855086	EntrezGene:LOC100855086
GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF51
PFAM:PF02519	ProteinID:CCB45060	ProteinID:CCB45060.1	RefSeq:XP_003632936	RefSeq:XP_003632936.1	UniParc:UPI0002109A3C
UniProt:F6GYM4	wikigene:100855086	wikigene:LOC100855086	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr9:+:21487058..21487600

Molecular Weight (calculated)

18772.6 Da

IEP (calculated)

7.962

GRAVY (calculated)

-0.277

Length

164 amino acids

Sequence
(BLAST)

001: MATSVNINQI VRLKQVMKRW KTMSMKLRHA PSPDATDSET DTDIEACKPR TPSGFLAIYV GSERERFLIP TRYVNLPVFV TLLKRAEEEY GFKFSGGIVV
101: PCEVGFFRKV LEFLEKDEKK FGSLELDEFL KIFSEVGFDS SCKASSYNIN TCHDQFTHLM HKAS

Best Arabidopsis Sequence Match ( AT3G43120.1 )
(BLAST)

001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE

Arabidopsis Description

Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.