Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 91.24 | 88.65 |
| CDY29803 | Canola | cytosol | 40.15 | 47.01 |
| Bra035803.1-P | Field mustard | cytosol | 39.42 | 46.15 |
| CDY25398 | Canola | cytosol | 39.42 | 46.15 |
| AT3G20220.1 | Thale cress | cytosol | 36.5 | 42.37 |
| TraesCS7D01G411000.1 | Wheat | mitochondrion | 36.5 | 40.65 |
| TraesCS7B01G318100.1 | Wheat | mitochondrion | 35.77 | 40.16 |
| TraesCS7A01G418000.1 | Wheat | mitochondrion | 35.77 | 39.84 |
| Os02t0143300-00 | Rice | mitochondrion | 33.58 | 37.7 |
| KRH44682 | Soybean | plastid | 36.5 | 36.23 |
| Zm00001d014682_P001 | Maize | mitochondrion | 34.31 | 36.15 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 32.85 | 36.0 |
| TraesCS6B01G143400.1 | Wheat | cytosol | 32.12 | 35.2 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 32.12 | 35.2 |
| EER90331 | Sorghum | mitochondrion | 34.31 | 35.07 |
| Zm00001d004384_P001 | Maize | mitochondrion | 32.85 | 34.35 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 31.39 | 34.13 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 37.23 | 33.33 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 37.23 | 31.48 |
| VIT_08s0007g03120.t01 | Wine grape | mitochondrion | 27.74 | 30.4 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 33.58 | 28.22 |
| OQU81155 | Sorghum | plastid | 34.31 | 26.55 |
| HORVU7Hr1G096870.1 | Barley | plastid | 35.04 | 26.37 |
| VIT_09s0054g00660.t01 | Wine grape | cytosol, plastid | 32.12 | 25.43 |
| VIT_09s0054g00740.t01 | Wine grape | cytosol, plastid | 32.85 | 25.42 |
| VIT_11s0078g00400.t01 | Wine grape | plastid | 28.47 | 23.93 |
| EES04503 | Sorghum | plastid | 32.85 | 23.44 |
| VIT_09s0054g00680.t01 | Wine grape | mitochondrion | 24.82 | 20.73 |
Protein Annotations
| EntrezGene:100247885 | wikigene:100247885 | MapMan:35.2 | EMBL:AM486907 | ProteinID:CAN62213 | ProteinID:CAN62213.1 |
| ProteinID:CBI18451 | ProteinID:CBI18451.3 | UniProt:D7SS19 | EMBL:FN594972 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | EntrezGene:LOC100247885 | wikigene:LOC100247885 | PFAM:PF02519 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 |
| InterPro:SAUR_fam | UniParc:UPI0001984021 | ArrayExpress:VIT_09s0054g00730 | EnsemblPlantsGene:VIT_09s0054g00730 | EnsemblPlants:VIT_09s0054g00730.t01 | RefSeq:XP_002266875 |
| RefSeq:XP_002266875.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:21569331..21569744
Molecular Weight (calculated)
16095.8 Da
IEP (calculated)
9.614
GRAVY (calculated)
-0.385
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMRSKKILR LWLWWAPQLR RRSPALPLNK EGFQVHSTET LRGSLLASQY LCQWNLKEVP RGFLAVYVGP ELRRFVIPTS YLSMPDFRAL MERMADEFGF
101: EQEGGLQIPC EEEDFEEILG KCLTRHKMKK HKGVVQN
101: EQEGGLQIPC EEEDFEEILG KCLTRHKMKK HKGVVQN
001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK
101: ESVFEEILIR YMSCDKKK
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.