Factsheet for GSMUA_Achr5P24140_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 4
cytosol 2
plasma membrane 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0143300-00	Rice	mitochondrion	36.6	45.9
TraesCS6A01G115600.1	Wheat	cytosol	34.64	42.4
TraesCS7D01G411000.1	Wheat	mitochondrion	33.99	42.28
HORVU6Hr1G020840.1	Barley	cytosol	34.64	42.06
TraesCS7B01G318100.1	Wheat	mitochondrion	33.33	41.8
TraesCS6D01G104400.1	Wheat	cytosol	33.99	41.6
TraesCS6B01G143400.1	Wheat	cytosol	33.99	41.6
TraesCS7A01G418000.1	Wheat	mitochondrion	33.33	41.46
Zm00001d004384_P001	Maize	mitochondrion	33.99	39.69
EER90331	Sorghum	mitochondrion	34.64	39.55
Zm00001d014682_P001	Maize	mitochondrion	33.33	39.23
VIT_09s0054g00730.t01	Wine grape	mitochondrion	33.33	37.23
CDY29803	Canola	cytosol	27.45	35.9
VIT_09s0054g00670.t01	Wine grape	mitochondrion	32.68	35.46
Bra035803.1-P	Field mustard	cytosol	26.8	35.04
CDY25398	Canola	cytosol	26.8	35.04
AT3G20220.1	Thale cress	cytosol	26.8	34.75
GSMUA_Achr5P24150_001	Banana	mitochondrion	25.49	32.5
GSMUA_Achr7P19840_001	Banana	cytosol	32.68	32.47
GSMUA_Achr1P10530_001	Banana	cytosol	26.14	32.0
GSMUA_Achr9P19570_001	Banana	cytosol, plastid	25.49	31.97
GSMUA_Achr6P31030_001	Banana	cytosol, mitochondrion	32.03	31.82
KRH44682	Soybean	plastid	28.1	31.16
HORVU7Hr1G096870.1	Barley	plastid	36.6	30.77
GSMUA_Achr4P05740_001	Banana	cytosol, plastid	30.72	30.72
OQU81155	Sorghum	plastid	35.29	30.51
GSMUA_Achr5P22090_001	Banana	cytosol	30.07	29.87
GSMUA_Achr6P03720_001	Banana	cytosol	27.45	28.0
EES04503	Sorghum	plastid	33.99	27.08
GSMUA_Achr4P12510_001	Banana	cytosol	13.73	25.93
GSMUA_Achr7P19700_001	Banana	mitochondrion	24.84	25.5
GSMUA_Achr3P05530_001	Banana	mitochondrion	24.18	24.83
GSMUA_Achr9P14000_001	Banana	mitochondrion	24.18	23.57

Protein Annotations

EnsemblPlants:GSMUA_Achr5P24140_001	EnsemblPlants:GSMUA_Achr5T24140_001	EnsemblPlantsGene:GSMUA_Achr5G24140_001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF111	PFAM:PF02519	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI000295C499	UniProt:M0T189	MapMan:35.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G24140_001]

Coordinates

chr5:+:25616383..25616844

Molecular Weight (calculated)

17166.9 Da

IEP (calculated)

9.531

GRAVY (calculated)

-0.229

Length

153 amino acids

Sequence
(BLAST)

001: MFFNLLFFSS SSLAFGFDHS IDCTAMGYSI RNPKIPAALF PLRTKKNAGR DSFRQSLLVD EPTNTAVPKG CMAVYVGDGM RRFVIPTSYL RLPAFRQLME
101: KVEEEFGFDQ AGGLRIPCEE EDFQELLDAL ADSTPAKPKK KKKKTLKSLV KMA

Best Arabidopsis Sequence Match ( AT3G20220.1 )
(BLAST)

001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.