Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035803.1-P | Field mustard | cytosol | 99.15 | 99.15 |
| CDY25398 | Canola | cytosol | 99.15 | 99.15 |
| AT3G20220.1 | Thale cress | cytosol | 87.18 | 86.44 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 47.01 | 40.15 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 44.44 | 36.88 |
| TraesCS7D01G411000.1 | Wheat | mitochondrion | 35.04 | 33.33 |
| TraesCS7B01G318100.1 | Wheat | mitochondrion | 34.19 | 32.79 |
| KRH44682 | Soybean | plastid | 38.46 | 32.61 |
| TraesCS7A01G418000.1 | Wheat | mitochondrion | 34.19 | 32.52 |
| Os02t0143300-00 | Rice | mitochondrion | 32.48 | 31.15 |
| Zm00001d014682_P001 | Maize | mitochondrion | 33.33 | 30.0 |
| EER90331 | Sorghum | mitochondrion | 33.33 | 29.1 |
| Zm00001d004384_P001 | Maize | mitochondrion | 32.48 | 29.01 |
| TraesCS6B01G143400.1 | Wheat | cytosol | 30.77 | 28.8 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 30.77 | 28.8 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 30.77 | 28.8 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 29.91 | 27.78 |
| CDX84572 | Canola | cytosol, mitochondrion | 29.91 | 27.56 |
| CDX79664 | Canola | mitochondrion | 29.91 | 27.56 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 35.9 | 27.45 |
| CDX75063 | Canola | mitochondrion | 29.91 | 26.92 |
| CDX84150 | Canola | mitochondrion | 29.91 | 26.92 |
| CDY45067 | Canola | cytosol | 36.75 | 26.06 |
| CDY12336 | Canola | cytosol | 35.04 | 25.79 |
| CDY16564 | Canola | cytosol | 35.9 | 25.3 |
| CDX88840 | Canola | cytosol | 36.75 | 25.29 |
| CDX70944 | Canola | cytosol | 35.9 | 24.71 |
| CDX92434 | Canola | cytosol | 35.04 | 24.7 |
| CDY43742 | Canola | mitochondrion | 24.79 | 23.58 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 35.04 | 23.3 |
| OQU81155 | Sorghum | plastid | 35.04 | 23.16 |
| CDY13423 | Canola | nucleus | 35.04 | 23.03 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 34.19 | 22.86 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 35.04 | 22.53 |
| HORVU7Hr1G096870.1 | Barley | plastid | 34.19 | 21.98 |
| CDY43741 | Canola | cytosol, mitochondrion | 23.08 | 21.95 |
| CDX68733 | Canola | nucleus | 35.04 | 21.81 |
| CDY28255 | Canola | nucleus | 34.19 | 21.28 |
| EES04503 | Sorghum | plastid | 34.19 | 20.83 |
| CDX72302 | Canola | nucleus | 35.04 | 19.62 |
Protein Annotations
| EnsemblPlants:CDY29803 | EnsemblPlantsGene:GSBRNA2T00043693001 | GO:A0A078GYZ0 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 | PFAM:PF02519 | ProteinID:CDY29803 | ProteinID:CDY29803.1 |
| UniParc:UPI0004EF0657 | UniProt:A0A078GYZ0 | MapMan:35.1 | : | : | : |
Description
BnaC05g31870DBnaC05g31870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYZ0]
Coordinates
chrLK032244:+:275176..275529
Molecular Weight (calculated)
13737.5 Da
IEP (calculated)
7.507
GRAVY (calculated)
-0.669
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLDFIVRL KNQEKRRNRR SETNIKASLL SGELSDGRRR ARDQNGVPRG HLAVYVGDEM QRFVIPTKYL QYPEFKVLME EVADEFGYEH EGGIHIPCEE
101: SVFEEILIRY MSCDKKK
101: SVFEEILIRY MSCDKKK
001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK
101: ESVFEEILIR YMSCDKKK
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.