Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY28255 | Canola | nucleus | 98.94 | 98.94 |
CDY13423 | Canola | nucleus | 83.51 | 88.2 |
CDY36449 | Canola | cytosol, nucleus, plastid | 81.38 | 84.07 |
AT4G31320.1 | Thale cress | cytosol | 82.45 | 82.01 |
CDX72302 | Canola | nucleus | 87.77 | 78.95 |
CDY20311 | Canola | cytosol, mitochondrion, nucleus | 71.28 | 76.57 |
CDY46148 | Canola | cytosol, mitochondrion, nucleus | 70.74 | 75.57 |
GSMUA_Achr1P10530_001 | Banana | cytosol | 40.43 | 60.8 |
KRH16185 | Soybean | nucleus | 55.32 | 58.76 |
KRH04818 | Soybean | cytosol | 52.66 | 57.23 |
VIT_04s0008g02800.t01 | Wine grape | plastid | 48.4 | 56.17 |
KRH52631 | Soybean | plastid | 51.06 | 56.14 |
GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 36.17 | 55.74 |
KRH61972 | Soybean | plastid | 50.0 | 54.97 |
Zm00001d026262_P001 | Maize | cytosol | 46.28 | 51.48 |
OQU82277 | Sorghum | nucleus | 46.81 | 51.46 |
GSMUA_Achr6P03720_001 | Banana | cytosol | 40.96 | 51.33 |
Os04t0608300-01 | Rice | cytosol | 47.87 | 51.14 |
Zm00001d002374_P001 | Maize | nucleus | 45.21 | 50.9 |
EES06266 | Sorghum | cytosol, nucleus, plastid | 31.91 | 48.39 |
GSMUA_Achr5P24150_001 | Banana | mitochondrion | 30.85 | 48.33 |
TraesCS6D01G104500.1 | Wheat | cytosol | 30.85 | 46.4 |
Os02t0143400-00 | Rice | cytosol, mitochondrion | 31.91 | 46.15 |
TraesCS7A01G418100.1 | Wheat | mitochondrion | 32.45 | 45.52 |
TraesCS2D01G428000.1 | Wheat | nucleus | 43.09 | 45.51 |
TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 43.09 | 45.25 |
TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 32.45 | 44.85 |
TraesCS6B01G143500.1 | Wheat | cytosol | 30.32 | 44.53 |
TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 32.45 | 44.53 |
TraesCS2A01G430400.1 | Wheat | nucleus | 43.09 | 44.51 |
TraesCS6A01G115700.1 | Wheat | cytosol | 29.79 | 43.75 |
HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 42.02 | 43.65 |
Zm00001d053884_P001 | Maize | cytosol | 30.32 | 43.18 |
OQU76999 | Sorghum | cytosol | 30.85 | 40.0 |
Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 29.79 | 38.1 |
CDY16564 | Canola | cytosol | 32.45 | 36.75 |
CDX92434 | Canola | cytosol | 31.91 | 36.14 |
CDY45067 | Canola | cytosol | 31.38 | 35.76 |
CDY29803 | Canola | cytosol | 21.81 | 35.04 |
CDY25398 | Canola | cytosol | 21.81 | 35.04 |
CDX70944 | Canola | cytosol | 29.79 | 32.94 |
CDX88840 | Canola | cytosol | 29.79 | 32.94 |
HORVU7Hr1G096880.1 | Barley | mitochondrion | 32.98 | 32.46 |
CDY12336 | Canola | cytosol | 26.6 | 31.45 |
Os06t0701900-00 | Rice | mitochondrion | 31.38 | 30.1 |
CDX84572 | Canola | cytosol, mitochondrion | 15.96 | 23.62 |
CDX84150 | Canola | mitochondrion | 15.96 | 23.08 |
CDX75063 | Canola | mitochondrion | 15.96 | 23.08 |
CDX79664 | Canola | mitochondrion | 14.89 | 22.05 |
CDY43741 | Canola | cytosol, mitochondrion | 12.77 | 19.51 |
CDY43742 | Canola | mitochondrion | 12.77 | 19.51 |
Protein Annotations
EnsemblPlants:CDX68733 | EnsemblPlantsGene:GSBRNA2T00130427001 | GO:A0A078C0P3 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF59 | PFAM:PF02519 | ProteinID:CDX68733 | ProteinID:CDX68733.1 |
SEG:seg | UniParc:UPI0004EE5B7B | MapMan:35.2 | : | : | : |
Description
BnaC01g07200D
Coordinates
chrLK031789:-:1014999..1015565
Molecular Weight (calculated)
21200.2 Da
IEP (calculated)
9.584
GRAVY (calculated)
-0.685
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDSASEA KKSNKIREIV KLQQILKKWR KAAHASKQAS NKIDDEENNN KLNRTGSGSA SKGIKFLKRT LSFTDVTAVP KGYLAVSVGK EEKRYKIPTD
101: YLSHQAFHAL LREAEEEFGF QQAGVLKIPC EVAVFESILK IMEDNKADVY LTTQECRFNA TTEEVISYRH PSDIPRTPSH QPHSPMCR
101: YLSHQAFHAL LREAEEEFGF QQAGVLKIPC EVAVFESILK IMEDNKADVY LTTQECRFNA TTEEVISYRH PSDIPRTPSH QPHSPMCR
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.