Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13423 | Canola | nucleus | 81.32 | 83.15 |
| AT4G31320.1 | Thale cress | cytosol | 84.62 | 81.48 |
| CDX68733 | Canola | nucleus | 84.07 | 81.38 |
| CDY28255 | Canola | nucleus | 84.07 | 81.38 |
| CDX72302 | Canola | nucleus | 86.26 | 75.12 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 71.98 | 74.86 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 71.43 | 73.86 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 42.86 | 62.4 |
| KRH16185 | Soybean | nucleus | 56.59 | 58.19 |
| KRH52631 | Soybean | plastid | 53.3 | 56.73 |
| KRH04818 | Soybean | cytosol | 53.85 | 56.65 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 37.91 | 56.56 |
| KRH61972 | Soybean | plastid | 52.2 | 55.56 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 49.45 | 55.56 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 42.31 | 51.33 |
| Zm00001d002374_P001 | Maize | nucleus | 46.15 | 50.3 |
| Zm00001d026262_P001 | Maize | cytosol | 46.7 | 50.3 |
| OQU82277 | Sorghum | nucleus | 47.25 | 50.29 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 32.97 | 50.0 |
| Os04t0608300-01 | Rice | cytosol | 47.25 | 48.86 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 32.97 | 48.39 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 31.32 | 45.6 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 33.52 | 45.52 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 32.42 | 45.38 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 33.52 | 44.85 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 33.52 | 44.53 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 43.41 | 44.38 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 43.41 | 44.13 |
| Zm00001d053884_P001 | Maize | cytosol | 31.87 | 43.94 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 30.77 | 43.75 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 30.77 | 43.75 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 43.41 | 43.41 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 42.86 | 43.09 |
| OQU76999 | Sorghum | cytosol | 31.87 | 40.0 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 30.77 | 38.1 |
| CDY45067 | Canola | cytosol | 32.97 | 36.36 |
| CDY16564 | Canola | cytosol | 32.42 | 35.54 |
| CDY29803 | Canola | cytosol | 22.53 | 35.04 |
| CDY25398 | Canola | cytosol | 22.53 | 35.04 |
| CDX92434 | Canola | cytosol | 31.87 | 34.94 |
| CDX88840 | Canola | cytosol | 31.32 | 33.53 |
| CDX70944 | Canola | cytosol | 31.32 | 33.53 |
| CDY12336 | Canola | cytosol | 28.57 | 32.7 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 32.97 | 31.41 |
| Os06t0701900-00 | Rice | mitochondrion | 31.87 | 29.59 |
| CDX84572 | Canola | cytosol, mitochondrion | 16.48 | 23.62 |
| CDX84150 | Canola | mitochondrion | 16.48 | 23.08 |
| CDX75063 | Canola | mitochondrion | 16.48 | 23.08 |
| CDX79664 | Canola | mitochondrion | 15.38 | 22.05 |
| CDY43742 | Canola | mitochondrion | 13.19 | 19.51 |
| CDY43741 | Canola | cytosol, mitochondrion | 13.19 | 19.51 |
Protein Annotations
| EnsemblPlants:CDY36449 | EnsemblPlantsGene:GSBRNA2T00062095001 | GO:A0A078HGB0 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF59 | PFAM:PF02519 | ProteinID:CDY36449 | ProteinID:CDY36449.1 |
| SEG:seg | UniParc:UPI0004EF1DFE | UniProt:A0A078HGB0 | MapMan:35.2 | : | : |
Description
BnaC03g67690DBnaC03g67690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGB0]
Coordinates
chrLK032376:+:141618..142166
Molecular Weight (calculated)
20582.7 Da
IEP (calculated)
8.882
GRAVY (calculated)
-0.624
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKKNKIRE IVKLQQILKK WRKVAQASKQ ANDNKINNEE DISNINKTGS GSGSKSIKFL KRTLSFPDVT AVPKGYLAVS VGKEEKRYKI PTEYLSHQAF
101: QALLPEAEEE FGFQQAGVLK IPCEVAVFES ILMIMEDNKT DPYLPTQECR FNATTTEEVI SYRNPSDCPK TPSHQPLSPM CR
101: QALLPEAEEE FGFQQAGVLK IPCEVAVFES ILMIMEDNKT DPYLPTQECR FNATTTEEVI SYRNPSDCPK TPSHQPLSPM CR
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.