Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88840 | Canola | cytosol | 98.82 | 98.82 |
| CDY45067 | Canola | cytosol | 84.71 | 87.27 |
| CDY16564 | Canola | cytosol | 84.12 | 86.14 |
| CDX92434 | Canola | cytosol | 82.94 | 84.94 |
| Bra006576.1-P | Field mustard | cytosol | 98.24 | 77.67 |
| CDY12336 | Canola | cytosol | 70.59 | 75.47 |
| AT5G20810.2 | Thale cress | cytosol | 81.76 | 73.16 |
| KRH19368 | Soybean | cytosol | 57.06 | 61.78 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 58.24 | 60.74 |
| KRH37551 | Soybean | cytosol | 59.41 | 60.48 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 50.59 | 55.84 |
| PGSC0003DMT400035330 | Potato | cytosol | 55.88 | 55.23 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 49.41 | 54.55 |
| KRH12612 | Soybean | mitochondrion | 33.53 | 54.29 |
| PGSC0003DMT400007582 | Potato | nucleus | 57.06 | 54.19 |
| Solyc12g009280.1.1 | Tomato | nucleus | 57.06 | 54.19 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 48.82 | 53.9 |
| KRH04133 | Soybean | cytosol | 32.94 | 51.85 |
| Solyc05g025920.2.1 | Tomato | nucleus | 55.88 | 47.98 |
| Solyc07g042470.2.1 | Tomato | cytosol | 56.47 | 47.29 |
| PGSC0003DMT400007836 | Potato | nucleus | 57.06 | 45.54 |
| Os09t0437400-00 | Rice | cytosol | 48.82 | 43.68 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 42.35 | 41.62 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 44.12 | 41.44 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 42.94 | 39.46 |
| Zm00001d020606_P001 | Maize | cytosol | 44.71 | 39.38 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 41.76 | 38.38 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 41.76 | 38.17 |
| CDY29803 | Canola | cytosol | 24.71 | 35.9 |
| KRH02563 | Soybean | cytosol | 58.82 | 35.71 |
| CDY25398 | Canola | cytosol | 24.12 | 35.04 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 16.47 | 34.57 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 31.76 | 32.53 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 33.53 | 32.39 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 31.18 | 32.32 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 32.94 | 32.0 |
| EER96781 | Sorghum | cytosol | 45.88 | 31.97 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 29.41 | 31.65 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 33.53 | 31.32 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 28.82 | 31.01 |
| CDY13423 | Canola | nucleus | 32.35 | 30.9 |
| CDX79664 | Canola | mitochondrion | 22.94 | 30.71 |
| CDX84572 | Canola | cytosol, mitochondrion | 22.35 | 29.92 |
| CDX68733 | Canola | nucleus | 32.94 | 29.79 |
| CDY28255 | Canola | nucleus | 32.94 | 29.79 |
| CDX75063 | Canola | mitochondrion | 22.35 | 29.23 |
| CDX84150 | Canola | mitochondrion | 22.35 | 29.23 |
| CDY43742 | Canola | mitochondrion | 20.0 | 27.64 |
| CDY43741 | Canola | cytosol, mitochondrion | 20.0 | 27.64 |
| CDX72302 | Canola | nucleus | 33.53 | 27.27 |
| Zm00001d045039_P001 | Maize | nucleus | 34.12 | 24.58 |
Protein Annotations
| EnsemblPlants:CDX70944 | EnsemblPlantsGene:GSBRNA2T00140858001 | GO:A0A078C423 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | ProteinID:CDX70944 | ProteinID:CDX70944.1 |
| UniParc:UPI0004EAB8D1 | MapMan:35.1 | : | : | : | : |
Description
BnaC03g10280D
Coordinates
chrLK031791:+:2865915..2867671
Molecular Weight (calculated)
18720.4 Da
IEP (calculated)
4.772
GRAVY (calculated)
-0.320
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNEAKLT GIRQVVRLKE ILQKWQTVTI GSKSDVPPLA AGKQAAAMIS PAINKRLLAV KNCDSDEENC QSPEPPVDVP RGYLAVYVGP ELRRFIIPTS
101: YLGHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKFLVK CMENNSKDHH PDDGSAGDAV AAMEECTQIK
101: YLGHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKFLVK CMENNSKDHH PDDGSAGDAV AAMEECTQIK
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.