Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007582 | Potato | nucleus | 92.74 | 92.74 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 58.66 | 64.42 |
| KRH19368 | Soybean | cytosol | 52.51 | 59.87 |
| Solyc07g042470.2.1 | Tomato | cytosol | 67.04 | 59.11 |
| AT3G43120.1 | Thale cress | cytosol | 52.51 | 58.75 |
| CDY16564 | Canola | cytosol | 54.19 | 58.43 |
| Bra034954.1-P | Field mustard | cytosol | 51.4 | 57.86 |
| CDY12336 | Canola | cytosol | 51.4 | 57.86 |
| CDX92434 | Canola | cytosol | 53.63 | 57.83 |
| KRH37551 | Soybean | cytosol | 53.63 | 57.48 |
| Bra002330.1-P | Field mustard | cytosol | 53.07 | 57.23 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 49.16 | 57.14 |
| CDX70944 | Canola | cytosol | 54.19 | 57.06 |
| CDY45067 | Canola | cytosol | 52.51 | 56.97 |
| Bra020127.1-P | Field mustard | cytosol | 52.51 | 56.97 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 48.6 | 56.49 |
| CDX88840 | Canola | cytosol | 53.07 | 55.88 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 48.04 | 55.84 |
| Solyc05g025920.2.1 | Tomato | nucleus | 61.45 | 55.56 |
| KRH12612 | Soybean | mitochondrion | 31.84 | 54.29 |
| KRH04133 | Soybean | cytosol | 31.84 | 52.78 |
| AT5G20810.2 | Thale cress | cytosol | 54.75 | 51.58 |
| Bra006576.1-P | Field mustard | cytosol | 53.07 | 44.19 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 40.22 | 41.62 |
| Os09t0437400-00 | Rice | cytosol | 44.13 | 41.58 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 40.78 | 40.33 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 40.22 | 38.92 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 39.66 | 38.38 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 39.66 | 38.17 |
| Zm00001d020606_P001 | Maize | cytosol | 40.78 | 37.82 |
| KRH02563 | Soybean | cytosol | 54.75 | 35.0 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 31.84 | 34.34 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 15.08 | 33.33 |
| Solyc10g083320.1.1 | Tomato | mitochondrion | 23.46 | 32.81 |
| Solyc07g014620.1.1 | Tomato | mitochondrion | 27.37 | 32.67 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 27.37 | 31.01 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 27.37 | 31.01 |
| EER96781 | Sorghum | cytosol | 41.9 | 30.74 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 27.93 | 30.49 |
| Solyc03g124020.1.1 | Tomato | nucleus | 31.84 | 30.32 |
| Solyc05g046320.1.1 | Tomato | plastid | 29.05 | 30.23 |
| Solyc09g009980.1.1 | Tomato | mitochondrion | 21.79 | 26.35 |
| Zm00001d045039_P001 | Maize | nucleus | 31.28 | 23.73 |
Protein Annotations
| EnsemblPlants:Solyc12g009280.1.1 | EnsemblPlantsGene:Solyc12g009280.1 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | SEG:seg | UniParc:UPI000276983C | UniProt:K4DC16 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:2551862..2552938
Molecular Weight (calculated)
20386.2 Da
IEP (calculated)
8.138
GRAVY (calculated)
-0.712
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHGETKLT GIRQIVRLKQ LLHKWQNVTF TPNTTKGKNH NPKVECTKSS FNNRKNETCR GGISPSISKR LRSSNVYWDS DEENCQSPES PRGVPKGYLA
101: VYVGPELRRF IIPTTYLSDS LFKKLLEKVE EEFGFDHSGG LTIPCEIETF KYLLQCMENH QRCLPVDSHH NGSDAGIMA
101: VYVGPELRRF IIPTTYLSDS LFKKLLEKVE EEFGFDHSGG LTIPCEIETF KYLLQCMENH QRCLPVDSHH NGSDAGIMA
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.