Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12336 | Canola | cytosol | 92.5 | 93.08 |
| Bra034954.1-P | Field mustard | cytosol | 92.5 | 93.08 |
| KRH19368 | Soybean | cytosol | 65.0 | 66.24 |
| AT5G20810.2 | Thale cress | cytosol | 77.5 | 65.26 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 60.62 | 59.51 |
| KRH37551 | Soybean | cytosol | 61.25 | 58.68 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 53.75 | 55.84 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 53.75 | 55.84 |
| PGSC0003DMT400035330 | Potato | cytosol | 58.75 | 54.65 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 52.5 | 54.55 |
| KRH04133 | Soybean | cytosol | 35.62 | 52.78 |
| Solyc12g009280.1.1 | Tomato | nucleus | 58.75 | 52.51 |
| KRH12612 | Soybean | mitochondrion | 33.75 | 51.43 |
| PGSC0003DMT400007582 | Potato | nucleus | 57.5 | 51.4 |
| Solyc07g042470.2.1 | Tomato | cytosol | 58.75 | 46.31 |
| Solyc05g025920.2.1 | Tomato | nucleus | 56.88 | 45.96 |
| PGSC0003DMT400007836 | Potato | nucleus | 58.75 | 44.13 |
| Os09t0437400-00 | Rice | cytosol | 50.62 | 42.63 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 46.88 | 41.44 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 43.75 | 40.46 |
| Zm00001d020606_P001 | Maize | cytosol | 48.12 | 39.9 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 45.0 | 38.92 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 44.38 | 38.38 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 44.38 | 38.17 |
| KRH02563 | Soybean | cytosol | 63.75 | 36.43 |
| EER96781 | Sorghum | cytosol | 49.38 | 32.38 |
| AT3G20220.1 | Thale cress | cytosol | 23.75 | 32.2 |
| AT2G24400.1 | Thale cress | cytosol, mitochondrion, nucleus | 35.0 | 31.46 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 31.25 | 30.12 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 15.0 | 29.63 |
| AT4G31320.1 | Thale cress | cytosol | 35.0 | 29.63 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 28.75 | 29.11 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 28.12 | 28.48 |
| AT2G36210.1 | Thale cress | mitochondrion | 23.75 | 28.15 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 27.5 | 26.83 |
| Zm00001d045039_P001 | Maize | nucleus | 34.38 | 23.31 |
Protein Annotations
| MapMan:35.1 | EntrezGene:823371 | ProteinID:AEE77766.1 | ArrayExpress:AT3G43120 | EnsemblPlantsGene:AT3G43120 | RefSeq:AT3G43120 |
| TAIR:AT3G43120 | RefSeq:AT3G43120-TAIR-G | EnsemblPlants:AT3G43120.1 | TAIR:AT3G43120.1 | ProteinID:CAB86483.1 | EMBL:DQ446724 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | RefSeq:NP_189898.1 | PFAM:PF02519 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | UniProt:Q9M249 | InterPro:SAUR_fam | UniParc:UPI000009F573 |
Description
Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
Coordinates
chr3:+:15094048..15095989
Molecular Weight (calculated)
17972.3 Da
IEP (calculated)
4.617
GRAVY (calculated)
-0.481
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.