Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020127.1-P | Field mustard | cytosol | 72.11 | 83.03 |
| CDY45067 | Canola | cytosol | 72.11 | 83.03 |
| CDY16564 | Canola | cytosol | 72.11 | 82.53 |
| CDX70944 | Canola | cytosol | 73.16 | 81.76 |
| CDX88840 | Canola | cytosol | 73.16 | 81.76 |
| CDX92434 | Canola | cytosol | 70.0 | 80.12 |
| Bra002330.1-P | Field mustard | cytosol | 69.47 | 79.52 |
| AT3G43120.1 | Thale cress | cytosol | 65.26 | 77.5 |
| Bra006576.1-P | Field mustard | cytosol | 76.84 | 67.91 |
| KRH19368 | Soybean | cytosol | 52.63 | 63.69 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 54.21 | 63.19 |
| KRH37551 | Soybean | cytosol | 54.74 | 62.28 |
| KRH12612 | Soybean | mitochondrion | 32.63 | 59.05 |
| PGSC0003DMT400035330 | Potato | cytosol | 53.16 | 58.72 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 46.32 | 57.14 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 45.79 | 56.49 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 45.79 | 56.49 |
| PGSC0003DMT400007582 | Potato | nucleus | 51.58 | 54.75 |
| Solyc12g009280.1.1 | Tomato | nucleus | 51.58 | 54.75 |
| KRH04133 | Soybean | cytosol | 31.05 | 54.63 |
| Solyc07g042470.2.1 | Tomato | cytosol | 53.16 | 49.75 |
| Solyc05g025920.2.1 | Tomato | nucleus | 50.0 | 47.98 |
| PGSC0003DMT400007836 | Potato | nucleus | 51.58 | 46.01 |
| Os09t0437400-00 | Rice | cytosol | 42.11 | 42.11 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 37.37 | 41.04 |
| Zm00001d020606_P001 | Maize | cytosol | 40.53 | 39.9 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 37.89 | 39.78 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 37.89 | 38.92 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 36.84 | 37.84 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 36.84 | 37.63 |
| KRH02563 | Soybean | cytosol | 53.16 | 36.07 |
| AT3G20220.1 | Thale cress | cytosol | 21.58 | 34.75 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 14.74 | 34.57 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 28.42 | 32.53 |
| AT2G24400.1 | Thale cress | cytosol, mitochondrion, nucleus | 30.0 | 32.02 |
| AT4G31320.1 | Thale cress | cytosol | 31.58 | 31.75 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 26.32 | 31.65 |
| EER96781 | Sorghum | cytosol | 40.53 | 31.56 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 25.79 | 31.01 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 26.32 | 30.49 |
| AT2G36210.1 | Thale cress | mitochondrion | 20.0 | 28.15 |
| Zm00001d045039_P001 | Maize | nucleus | 29.47 | 23.73 |
Protein Annotations
| MapMan:35.1 | EntrezGene:832204 | ProteinID:AED92892.1 | ArrayExpress:AT5G20810 | EnsemblPlantsGene:AT5G20810 | RefSeq:AT5G20810 |
| TAIR:AT5G20810 | RefSeq:AT5G20810-TAIR-G | EnsemblPlants:AT5G20810.2 | TAIR:AT5G20810.2 | Unigene:At.31144 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | RefSeq:NP_001031914.1 | PFAM:PF02519 |
| PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | UniProt:Q2V359 |
| InterPro:SAUR_fam | UniParc:UPI000016254C | : | : | : | : |
Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
Coordinates
chr5:+:7043801..7045712
Molecular Weight (calculated)
20991.2 Da
IEP (calculated)
6.935
GRAVY (calculated)
-0.583
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSGKPPK DQLLPRDHTM NSNPGGQPRL NPGTGLKSKP
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSGKPPK DQLLPRDHTM NSNPGGQPRL NPGTGLKSKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.