Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92434 | Canola | cytosol | 99.4 | 99.4 |
| CDY16564 | Canola | cytosol | 95.78 | 95.78 |
| Bra020127.1-P | Field mustard | cytosol | 81.33 | 81.82 |
| Bra034954.1-P | Field mustard | cytosol | 69.88 | 72.96 |
| AT5G20810.2 | Thale cress | cytosol | 79.52 | 69.47 |
| Bra006576.1-P | Field mustard | cytosol | 84.34 | 65.12 |
| KRH19368 | Soybean | cytosol | 58.43 | 61.78 |
| KRH37551 | Soybean | cytosol | 60.24 | 59.88 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 58.43 | 59.51 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 52.41 | 56.49 |
| PGSC0003DMT400035330 | Potato | cytosol | 57.23 | 55.23 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 51.2 | 55.19 |
| KRH12612 | Soybean | mitochondrion | 34.34 | 54.29 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 50.0 | 53.9 |
| Solyc12g009280.1.1 | Tomato | nucleus | 57.23 | 53.07 |
| KRH04133 | Soybean | cytosol | 34.34 | 52.78 |
| PGSC0003DMT400007582 | Potato | nucleus | 56.02 | 51.96 |
| Solyc05g025920.2.1 | Tomato | nucleus | 56.63 | 47.47 |
| Solyc07g042470.2.1 | Tomato | cytosol | 57.23 | 46.8 |
| PGSC0003DMT400007836 | Potato | nucleus | 57.23 | 44.6 |
| Os09t0437400-00 | Rice | cytosol | 50.6 | 44.21 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 43.37 | 41.62 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 43.98 | 40.33 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 44.58 | 40.0 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 43.98 | 39.46 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 43.98 | 39.25 |
| Zm00001d020606_P001 | Maize | cytosol | 45.18 | 38.86 |
| KRH02563 | Soybean | cytosol | 60.24 | 35.71 |
| Bra035803.1-P | Field mustard | cytosol | 24.1 | 34.19 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 16.27 | 33.33 |
| Bra032097.1-P | Field mustard | cytosol, mitochondrion, nucleus | 34.34 | 32.2 |
| EER96781 | Sorghum | cytosol | 46.39 | 31.56 |
| Bra011258.1-P | Field mustard | nucleus | 35.54 | 31.38 |
| Bra024013.1-P | Field mustard | nucleus | 35.54 | 31.05 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 30.72 | 30.72 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 30.12 | 30.49 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 28.92 | 30.38 |
| Bra023055.1-P | Field mustard | cytosol, mitochondrion | 22.89 | 29.92 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 28.31 | 29.75 |
| Bra005293.1-P | Field mustard | mitochondrion | 21.69 | 27.69 |
| Bra017254.1-P | Field mustard | cytosol, mitochondrion | 19.28 | 26.02 |
| Bra017255.1-P | Field mustard | mitochondrion | 18.67 | 25.2 |
| Zm00001d045039_P001 | Maize | nucleus | 33.13 | 23.31 |
Protein Annotations
| EnsemblPlants:Bra002330.1 | EnsemblPlants:Bra002330.1-P | EnsemblPlantsGene:Bra002330 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | UniParc:UPI0002544A45 | UniProt:M4CDP9 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT5G20810 (E=4e-075) | auxin-responsive protein, putative / small auxin up RNA (SAUR_B)
Coordinates
chrA10:-:10273301..10274086
Molecular Weight (calculated)
18386.7 Da
IEP (calculated)
4.310
GRAVY (calculated)
-0.373
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENSAAKLS GIRQIVRLKE ILQKWQTATI GPESDIAPLE AGKQAAAMIS PVINKRLFAV KNCDSDEENC QSPEPPADVP KGYLAVYVGP ELRRFIIPTT
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKFLIK CMENNPKDYH PDDSPAEDDA VAANED
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKFLIK CMENNPKDYH PDDSPAEDDA VAANED
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.