Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g009280.1.1 | Tomato | nucleus | 92.74 | 92.74 |
| PGSC0003DMT400035330 | Potato | cytosol | 65.36 | 68.02 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 58.66 | 64.42 |
| KRH19368 | Soybean | cytosol | 54.19 | 61.78 |
| KRH37551 | Soybean | cytosol | 54.75 | 58.68 |
| AT3G43120.1 | Thale cress | cytosol | 51.4 | 57.5 |
| CDY16564 | Canola | cytosol | 53.07 | 57.23 |
| CDX70944 | Canola | cytosol | 54.19 | 57.06 |
| CDX92434 | Canola | cytosol | 52.51 | 56.63 |
| Bra034954.1-P | Field mustard | cytosol | 50.28 | 56.6 |
| CDY12336 | Canola | cytosol | 50.28 | 56.6 |
| Bra002330.1-P | Field mustard | cytosol | 51.96 | 56.02 |
| CDX88840 | Canola | cytosol | 53.07 | 55.88 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 48.04 | 55.84 |
| CDY45067 | Canola | cytosol | 51.4 | 55.76 |
| Bra020127.1-P | Field mustard | cytosol | 51.4 | 55.76 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 47.49 | 55.19 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 47.49 | 55.19 |
| PGSC0003DMT400007836 | Potato | nucleus | 65.36 | 54.93 |
| KRH12612 | Soybean | mitochondrion | 31.84 | 54.29 |
| KRH04133 | Soybean | cytosol | 32.4 | 53.7 |
| AT5G20810.2 | Thale cress | cytosol | 54.75 | 51.58 |
| Bra006576.1-P | Field mustard | cytosol | 53.07 | 44.19 |
| Os09t0437400-00 | Rice | cytosol | 43.02 | 40.53 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 39.11 | 40.46 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 40.22 | 39.78 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 39.11 | 37.84 |
| Zm00001d020606_P001 | Maize | cytosol | 40.78 | 37.82 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 38.55 | 37.3 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 37.99 | 36.56 |
| KRH02563 | Soybean | cytosol | 55.31 | 35.36 |
| PGSC0003DMT400072615 | Potato | mitochondrion | 24.02 | 33.59 |
| PGSC0003DMT400023703 | Potato | nucleus | 32.4 | 33.14 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 30.73 | 33.13 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 14.53 | 32.1 |
| EER96781 | Sorghum | cytosol | 41.9 | 30.74 |
| PGSC0003DMT400035602 | Potato | mitochondrion, plastid | 28.49 | 30.72 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 26.26 | 29.75 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 26.26 | 29.75 |
| PGSC0003DMT400023116 | Potato | nucleus | 24.02 | 29.66 |
| PGSC0003DMT400053349 | Potato | mitochondrion, plastid | 26.82 | 29.09 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 26.26 | 28.66 |
| Zm00001d045039_P001 | Maize | nucleus | 30.17 | 22.88 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400007582 | EnsemblPlantsGene:PGSC0003DMG400002926 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | PGSC:PGSC0003DMG400002926 | SEG:seg | UniParc:UPI000294E803 |
| UniProt:M0ZT82 | MapMan:35.2 | : | : | : | : |
Description
SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002926]
Coordinates
chr12:-:3115663..3118049
Molecular Weight (calculated)
20242.1 Da
IEP (calculated)
8.238
GRAVY (calculated)
-0.627
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHGETKLT GIRQIVRLKQ LLHKWQNVTF TPNTTKGKPH SLKIGCTKSS INNRKNETHR GGISPSISKR LRSSNMYWDS DEDSCQSPES PHGVPKGYLA
101: VYVGPELRRF IIPTSYLSDS LFKKLLEKVE EEFGFDHSGG LTIPCEIETF KFLLQCMENH QRCLPVDSHH NGSDAGIMA
101: VYVGPELRRF IIPTSYLSDS LFKKLLEKVE EEFGFDHSGG LTIPCEIETF KFLLQCMENH QRCLPVDSHH NGSDAGIMA
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.