Factsheet for HORVU5Hr1G062580.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G212500.1	Wheat	cytosol	91.33	85.41
TraesCS5A01G211300.1	Wheat	cytosol	90.17	83.87
TraesCS5D01G222500.1	Wheat	cytosol	89.02	83.24
Os09t0437400-00	Rice	cytosol	74.57	67.89
Zm00001d020606_P001	Maize	cytosol	66.47	59.59
Zm00001d005803_P001	Maize	cytosol, mitochondrion, nucleus	60.12	57.46
GSMUA_Achr5P22090_001	Banana	cytosol	50.29	56.49
GSMUA_Achr7P19840_001	Banana	cytosol	49.71	55.84
EER96781	Sorghum	cytosol	67.63	47.95
VIT_11s0016g00520.t01	Wine grape	cytosol	42.77	45.4
KRH19368	Soybean	cytosol	41.04	45.22
PGSC0003DMT400035330	Potato	cytosol	43.93	44.19
AT3G43120.1	Thale cress	cytosol	40.46	43.75
CDY16564	Canola	cytosol	41.62	43.37
CDX92434	Canola	cytosol	41.62	43.37
Bra002330.1-P	Field mustard	cytosol	41.62	43.37
HORVU7Hr1G033320.1	Barley	cytosol	20.23	43.21
Bra020127.1-P	Field mustard	cytosol	41.04	43.03
CDY45067	Canola	cytosol	41.04	43.03
CDX88840	Canola	cytosol	42.2	42.94
KRH12612	Soybean	mitochondrion	26.01	42.86
CDY12336	Canola	cytosol	39.31	42.77
Bra034954.1-P	Field mustard	cytosol	39.31	42.77
CDX70944	Canola	cytosol	41.62	42.35
KRH37551	Soybean	cytosol	39.88	41.32
KRH04133	Soybean	cytosol	25.43	40.74
Solyc12g009280.1.1	Tomato	nucleus	41.62	40.22
PGSC0003DMT400007582	Potato	nucleus	40.46	39.11
Solyc07g042470.2.1	Tomato	cytosol	44.51	37.93
AT5G20810.2	Thale cress	cytosol	41.04	37.37
HORVU7Hr1G033340.1	Barley	cytosol	34.1	35.54
Solyc05g025920.2.1	Tomato	nucleus	40.46	35.35
Bra006576.1-P	Field mustard	cytosol	42.2	33.95
PGSC0003DMT400007836	Potato	nucleus	41.62	33.8
HORVU6Hr1G020840.1	Barley	cytosol	21.39	29.37
HORVU7Hr1G096880.1	Barley	mitochondrion	32.37	29.32
HORVU2Hr1G100360.1	Barley	cytosol, mitochondrion, nucleus	30.06	28.73
KRH02563	Soybean	cytosol	41.62	25.71
HORVU7Hr1G096870.1	Barley	plastid	22.54	21.43

Protein Annotations

EnsemblPlants:HORVU5Hr1G062580.1	EnsemblPlantsGene:HORVU5Hr1G062580	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF22	PFAM:PF02519	SEG:seg	UniParc:UPI000296EDC4	UniProt:M0Y4F6
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:486655083..486656394

Molecular Weight (calculated)

18833.0 Da

IEP (calculated)

4.343

GRAVY (calculated)

-0.338

Length

173 amino acids

Sequence
(BLAST)

001: MGDDGGKAAT TTIVRLRELL HKWALGARGD ADDGEEEEEE ETHAPAAGAV VSAAPSSIPP FVLRRLTRTA TVDSDDEGCH SPEAAPDVPR GYCPVYVGPE
101: QRRFVIPTSY LGHPVFRLLL EKAEEEFGFR HEGALAIPCE TEAFKYILQC VERHDKGLAA DDVDVDGMFP VVD

Best Arabidopsis Sequence Match ( AT3G43120.1 )
(BLAST)

001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE

Arabidopsis Description

Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.