Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G062580.1 | Barley | cytosol | 67.89 | 74.57 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 66.84 | 68.65 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 66.32 | 68.11 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 65.79 | 67.2 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 61.58 | 64.64 |
| Zm00001d020606_P001 | Maize | cytosol | 63.68 | 62.69 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 48.42 | 59.74 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 47.89 | 59.09 |
| EER96781 | Sorghum | cytosol | 65.79 | 51.23 |
| CDX92434 | Canola | cytosol | 44.74 | 51.2 |
| CDY16564 | Canola | cytosol | 44.74 | 51.2 |
| AT3G43120.1 | Thale cress | cytosol | 42.63 | 50.62 |
| Bra002330.1-P | Field mustard | cytosol | 44.21 | 50.6 |
| CDY12336 | Canola | cytosol | 42.11 | 50.31 |
| Bra034954.1-P | Field mustard | cytosol | 42.11 | 50.31 |
| Bra020127.1-P | Field mustard | cytosol | 43.68 | 50.3 |
| CDY45067 | Canola | cytosol | 43.68 | 50.3 |
| CDX88840 | Canola | cytosol | 44.21 | 49.41 |
| PGSC0003DMT400035330 | Potato | cytosol | 44.21 | 48.84 |
| CDX70944 | Canola | cytosol | 43.68 | 48.82 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 41.58 | 48.47 |
| KRH19368 | Soybean | cytosol | 40.0 | 48.41 |
| KRH37551 | Soybean | cytosol | 38.95 | 44.31 |
| Solyc12g009280.1.1 | Tomato | nucleus | 41.58 | 44.13 |
| PGSC0003DMT400007582 | Potato | nucleus | 40.53 | 43.02 |
| KRH12612 | Soybean | mitochondrion | 23.68 | 42.86 |
| AT5G20810.2 | Thale cress | cytosol | 42.11 | 42.11 |
| KRH04133 | Soybean | cytosol | 23.68 | 41.67 |
| Solyc07g042470.2.1 | Tomato | cytosol | 44.21 | 41.38 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 27.89 | 40.77 |
| Solyc05g025920.2.1 | Tomato | nucleus | 41.58 | 39.9 |
| Bra006576.1-P | Field mustard | cytosol | 44.21 | 39.07 |
| PGSC0003DMT400007836 | Potato | nucleus | 43.16 | 38.5 |
| Os02t0143300-00 | Rice | mitochondrion | 21.05 | 32.79 |
| Os04t0608300-01 | Rice | cytosol | 30.0 | 32.39 |
| KRH02563 | Soybean | cytosol | 41.05 | 27.86 |
| Os06t0701900-00 | Rice | mitochondrion | 28.42 | 27.55 |
Protein Annotations
| EnsemblPlants:Os09t0437400-00 | EnsemblPlantsGene:Os09g0437400 | EntrezGene:4347154 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | ProteinID:BAD36439.1 | ProteinID:BAF25178.1 |
| ProteinID:BAT08260.1 | RefSeq:XP_015611343.1 | SEG:seg | UniParc:UPI0000403A7E | UniProt:Q69LJ9 | MapMan:35.2 |
Description
SMALL AUXIN-UP RNA 38Similar to SAUR family protein. (Os09t0437400-00)
Coordinates
chr9:-:16143938..16144535
Molecular Weight (calculated)
20421.1 Da
IEP (calculated)
4.404
GRAVY (calculated)
-0.234
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDDGGGVKV AAAAATTATG MKQITRLREL LQKWQAMALG ANKGDVATAG DEEDEEVVEV APAAAAAAAI PPFVMRRLQR TVTVDSDDES CQSPEPPADV
101: PRGYCPVYVG PEQRRFVIPT RYLGHPVFRL LLEKAEEEFG FCHQGALAIP CETEAFKYIL QCVERHDNGL AAGDVVDGVV DVNDRAPPRD
101: PRGYCPVYVG PEQRRFVIPT RYLGHPVFRL LLEKAEEEFG FCHQGALAIP CETEAFKYIL QCVERHDNGL AAGDVVDGVV DVNDRAPPRD
001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
Arabidopsis Description
Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.