Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92434 | Canola | cytosol | 96.39 | 96.39 |
| Bra002330.1-P | Field mustard | cytosol | 95.78 | 95.78 |
| CDX70944 | Canola | cytosol | 86.14 | 84.12 |
| CDX88840 | Canola | cytosol | 86.14 | 84.12 |
| CDY45067 | Canola | cytosol | 81.33 | 81.82 |
| CDY12336 | Canola | cytosol | 71.08 | 74.21 |
| AT5G20810.2 | Thale cress | cytosol | 82.53 | 72.11 |
| KRH19368 | Soybean | cytosol | 58.43 | 61.78 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 59.64 | 60.74 |
| KRH37551 | Soybean | cytosol | 60.84 | 60.48 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 53.01 | 57.14 |
| PGSC0003DMT400035330 | Potato | cytosol | 57.83 | 55.81 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 51.2 | 55.19 |
| KRH12612 | Soybean | mitochondrion | 34.34 | 54.29 |
| Solyc12g009280.1.1 | Tomato | nucleus | 58.43 | 54.19 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 50.0 | 53.9 |
| PGSC0003DMT400007582 | Potato | nucleus | 57.23 | 53.07 |
| KRH04133 | Soybean | cytosol | 34.34 | 52.78 |
| Solyc05g025920.2.1 | Tomato | nucleus | 57.23 | 47.98 |
| Solyc07g042470.2.1 | Tomato | cytosol | 57.83 | 47.29 |
| PGSC0003DMT400007836 | Potato | nucleus | 57.83 | 45.07 |
| Os09t0437400-00 | Rice | cytosol | 51.2 | 44.74 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 43.37 | 41.62 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 44.58 | 40.0 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 43.37 | 39.78 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 43.98 | 39.46 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 43.98 | 39.25 |
| Zm00001d020606_P001 | Maize | cytosol | 45.18 | 38.86 |
| CDY29803 | Canola | cytosol | 25.3 | 35.9 |
| KRH02563 | Soybean | cytosol | 60.24 | 35.71 |
| CDY25398 | Canola | cytosol | 24.7 | 35.04 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 36.14 | 34.09 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 35.54 | 33.71 |
| CDY13423 | Canola | nucleus | 36.14 | 33.71 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 16.27 | 33.33 |
| CDX68733 | Canola | nucleus | 36.75 | 32.45 |
| CDY28255 | Canola | nucleus | 36.75 | 32.45 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 35.54 | 32.42 |
| EER96781 | Sorghum | cytosol | 45.78 | 31.15 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 30.72 | 30.72 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 30.12 | 30.49 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 28.92 | 30.38 |
| CDX84572 | Canola | cytosol, mitochondrion | 22.89 | 29.92 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 28.31 | 29.75 |
| CDX79664 | Canola | mitochondrion | 22.29 | 29.13 |
| CDX72302 | Canola | nucleus | 36.14 | 28.71 |
| CDX75063 | Canola | mitochondrion | 21.69 | 27.69 |
| CDX84150 | Canola | mitochondrion | 21.69 | 27.69 |
| CDY43741 | Canola | cytosol, mitochondrion | 19.28 | 26.02 |
| CDY43742 | Canola | mitochondrion | 18.67 | 25.2 |
| Zm00001d045039_P001 | Maize | nucleus | 33.13 | 23.31 |
Protein Annotations
| EnsemblPlants:CDY16564 | EnsemblPlantsGene:GSBRNA2T00094359001 | GO:A0A078FUA7 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | ProteinID:CDY16564 | ProteinID:CDY16564.1 |
| UniParc:UPI0004EC724E | UniProt:A0A078FUA7 | MapMan:35.1 | : | : | : |
Description
BnaC09g37090DBnaC09g37090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUA7]
Coordinates
chrLK032065:+:239845..241841
Molecular Weight (calculated)
18315.7 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.369
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNAAKLS GIRQIVRLKE ILQKWQTATI GPKSDIAPLA AGKQAAAMIS PVINKRLFSV KNCDSDEENC QSPEPPADVP KGYLAVYVGP ELRRFIIPTT
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKFLIK CMENNPKDYH PDDNSAGDDA VAANED
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKFLIK CMENNPKDYH PDDNSAGDDA VAANED
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.