Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G159100.1 | Wheat | cytosol | 67.47 | 70.89 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 66.27 | 69.62 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 65.66 | 66.46 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 30.12 | 61.73 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 37.35 | 40.26 |
| Zm00001d045039_P001 | Maize | nucleus | 56.63 | 39.83 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 36.14 | 38.96 |
| KRH12612 | Soybean | mitochondrion | 24.1 | 38.1 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 26.51 | 34.92 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 35.54 | 34.1 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 33.13 | 33.74 |
| Bra020127.1-P | Field mustard | cytosol | 32.53 | 32.73 |
| CDY45067 | Canola | cytosol | 32.53 | 32.73 |
| CDY12336 | Canola | cytosol | 31.33 | 32.7 |
| Bra034954.1-P | Field mustard | cytosol | 31.33 | 32.7 |
| KRH04133 | Soybean | cytosol | 21.08 | 32.41 |
| KRH19368 | Soybean | cytosol | 30.12 | 31.85 |
| Solyc12g009280.1.1 | Tomato | nucleus | 34.34 | 31.84 |
| CDX70944 | Canola | cytosol | 32.53 | 31.76 |
| AT3G43120.1 | Thale cress | cytosol | 30.12 | 31.25 |
| CDX88840 | Canola | cytosol | 31.93 | 31.18 |
| KRH37551 | Soybean | cytosol | 31.33 | 31.14 |
| PGSC0003DMT400035330 | Potato | cytosol | 31.93 | 30.81 |
| PGSC0003DMT400007582 | Potato | nucleus | 33.13 | 30.73 |
| CDY16564 | Canola | cytosol | 30.72 | 30.72 |
| CDX92434 | Canola | cytosol | 30.72 | 30.72 |
| Bra002330.1-P | Field mustard | cytosol | 30.72 | 30.72 |
| AT5G20810.2 | Thale cress | cytosol | 32.53 | 28.42 |
| Solyc05g025920.2.1 | Tomato | nucleus | 31.93 | 26.77 |
| Solyc07g042470.2.1 | Tomato | cytosol | 31.93 | 26.11 |
| PGSC0003DMT400007836 | Potato | nucleus | 33.13 | 25.82 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 29.52 | 25.65 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 27.71 | 25.41 |
| HORVU7Hr1G096870.1 | Barley | plastid | 27.11 | 24.73 |
| Bra006576.1-P | Field mustard | cytosol | 31.93 | 24.65 |
| KRH02563 | Soybean | cytosol | 30.72 | 18.21 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G033340.1 | EnsemblPlantsGene:HORVU7Hr1G033340 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | SEG:seg | UniParc:UPI000B4859C7 | UniProt:A0A287VYW8 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:68104228..68105047
Molecular Weight (calculated)
18079.3 Da
IEP (calculated)
7.441
GRAVY (calculated)
-0.600
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGSNADGP AAAPATGLPK IIWIRQMLQR WQSTAAKTTG RTSNGSATGE RDANAHEQNR DVASANKLPL VVPAPEKQEE HGNGDGQPTT PGAPAGVPRG
101: CCAVYVGAER RRFVVPTEYL GNPVFRRLLE KAEEEFEFEY VGGALSIPCD TESFKYILAV MERHRK
101: CCAVYVGAER RRFVVPTEYL GNPVFRRLLE KAEEEFEFEY VGGALSIPCD TESFKYILAV MERHRK
001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
Arabidopsis Description
Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.