Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G033320.1 | Barley | cytosol | 20.76 | 60.49 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 38.56 | 57.59 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 38.56 | 57.59 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 39.83 | 56.63 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 37.29 | 53.66 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 27.97 | 42.86 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 27.97 | 42.86 |
| KRH12612 | Soybean | mitochondrion | 16.95 | 38.1 |
| CDY12336 | Canola | cytosol | 24.15 | 35.85 |
| Bra034954.1-P | Field mustard | cytosol | 24.15 | 35.85 |
| KRH37551 | Soybean | cytosol | 25.0 | 35.33 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 24.15 | 34.97 |
| KRH19368 | Soybean | cytosol | 22.88 | 34.39 |
| AT3G43120.1 | Thale cress | cytosol | 23.31 | 34.38 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 26.27 | 34.25 |
| Zm00001d020606_P001 | Maize | cytosol | 27.97 | 34.2 |
| CDX70944 | Canola | cytosol | 24.58 | 34.12 |
| CDY45067 | Canola | cytosol | 23.73 | 33.94 |
| Bra020127.1-P | Field mustard | cytosol | 23.73 | 33.94 |
| CDX88840 | Canola | cytosol | 24.15 | 33.53 |
| CDX92434 | Canola | cytosol | 23.31 | 33.13 |
| Bra002330.1-P | Field mustard | cytosol | 23.31 | 33.13 |
| CDY16564 | Canola | cytosol | 23.31 | 33.13 |
| KRH04133 | Soybean | cytosol | 14.83 | 32.41 |
| Zm00001d004384_P001 | Maize | mitochondrion | 17.8 | 32.06 |
| PGSC0003DMT400035330 | Potato | cytosol | 23.31 | 31.98 |
| Zm00001d053884_P001 | Maize | cytosol | 17.8 | 31.82 |
| Solyc12g009280.1.1 | Tomato | nucleus | 23.73 | 31.28 |
| PGSC0003DMT400007582 | Potato | nucleus | 22.88 | 30.17 |
| AT5G20810.2 | Thale cress | cytosol | 23.73 | 29.47 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 18.22 | 29.25 |
| Zm00001d014682_P001 | Maize | mitochondrion | 16.1 | 29.23 |
| Solyc05g025920.2.1 | Tomato | nucleus | 23.73 | 28.28 |
| Solyc07g042470.2.1 | Tomato | cytosol | 23.31 | 27.09 |
| Bra006576.1-P | Field mustard | cytosol | 24.15 | 26.51 |
| PGSC0003DMT400007836 | Potato | nucleus | 23.73 | 26.29 |
| Zm00001d026262_P001 | Maize | cytosol | 16.1 | 22.49 |
| Zm00001d002374_P001 | Maize | nucleus | 13.98 | 19.76 |
| KRH02563 | Soybean | cytosol | 22.46 | 18.93 |
Protein Annotations
| EnsemblPlants:Zm00001d045039_P001 | EnsemblPlants:Zm00001d045039_T001 | EnsemblPlantsGene:Zm00001d045039 | EntrezGene:103637951 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | ProteinID:AQL01364.1 |
| SEG:seg | UniParc:UPI000221E282 | UniProt:K7VDR0 | MapMan:35.2 | : | : |
Description
SAUR-like auxin-responsive protein family
Coordinates
chr9:+:10832838..10834164
Molecular Weight (calculated)
25720.3 Da
IEP (calculated)
4.389
GRAVY (calculated)
-0.790
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSMGHESS GGGADEEDPA GLQRVIWLRQ MLHRWQSSSS RIAAERRSSA SDDGDRANPD DANATTDQSS NGDPTPAAAD NASSSSSSRN QMLPAAPHGA
101: ADEEDEDEDR RLLSRVLLVE ERRRGCPPDA AACDSPMTPM TPDAPADVPR GCCPVYVGAE RRRFVVPTAY LGMPVFRRLL EKAEEEFEFD YHGGAVTIPC
201: DTEAFKYILV VMDRHRHGLV DDDGNEKHEE QDASSS
101: ADEEDEDEDR RLLSRVLLVE ERRRGCPPDA AACDSPMTPM TPDAPADVPR GCCPVYVGAE RRRFVVPTAY LGMPVFRRLL EKAEEEFEFD YHGGAVTIPC
201: DTEAFKYILV VMDRHRHGLV DDDGNEKHEE QDASSS
001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
Arabidopsis Description
Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.