Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034954.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| AT3G43120.1 | Thale cress | cytosol | 93.08 | 92.5 |
| CDY45067 | Canola | cytosol | 75.47 | 72.73 |
| CDY16564 | Canola | cytosol | 74.21 | 71.08 |
| CDX70944 | Canola | cytosol | 75.47 | 70.59 |
| CDX88840 | Canola | cytosol | 75.47 | 70.59 |
| CDX92434 | Canola | cytosol | 73.58 | 70.48 |
| KRH19368 | Soybean | cytosol | 63.52 | 64.33 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 59.75 | 58.28 |
| KRH37551 | Soybean | cytosol | 59.75 | 56.89 |
| KRH04133 | Soybean | cytosol | 37.74 | 55.56 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 53.46 | 55.19 |
| PGSC0003DMT400035330 | Potato | cytosol | 57.86 | 53.49 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 51.57 | 53.25 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 51.57 | 53.25 |
| Solyc12g009280.1.1 | Tomato | nucleus | 57.86 | 51.4 |
| KRH12612 | Soybean | mitochondrion | 33.33 | 50.48 |
| PGSC0003DMT400007582 | Potato | nucleus | 56.6 | 50.28 |
| Solyc07g042470.2.1 | Tomato | cytosol | 57.86 | 45.32 |
| Solyc05g025920.2.1 | Tomato | nucleus | 55.97 | 44.95 |
| PGSC0003DMT400007836 | Potato | nucleus | 58.49 | 43.66 |
| Os09t0437400-00 | Rice | cytosol | 50.31 | 42.11 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 45.28 | 39.78 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 42.77 | 39.31 |
| Zm00001d020606_P001 | Maize | cytosol | 46.54 | 38.34 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 44.03 | 37.84 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 43.4 | 37.3 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 43.4 | 37.1 |
| KRH02563 | Soybean | cytosol | 62.26 | 35.36 |
| CDY29803 | Canola | cytosol | 25.79 | 35.04 |
| CDY25398 | Canola | cytosol | 25.16 | 34.19 |
| EER96781 | Sorghum | cytosol | 49.06 | 31.97 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 32.7 | 31.33 |
| CDX84572 | Canola | cytosol, mitochondrion | 24.53 | 30.71 |
| CDX79664 | Canola | mitochondrion | 24.53 | 30.71 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 33.33 | 30.11 |
| CDX75063 | Canola | mitochondrion | 24.53 | 30.0 |
| CDX84150 | Canola | mitochondrion | 24.53 | 30.0 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 29.56 | 29.75 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 32.7 | 29.71 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 15.09 | 29.63 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 28.93 | 29.11 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 32.7 | 28.57 |
| CDY43741 | Canola | cytosol, mitochondrion | 22.01 | 28.46 |
| CDY13423 | Canola | nucleus | 30.82 | 27.53 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 28.3 | 27.44 |
| CDY28255 | Canola | nucleus | 31.45 | 26.6 |
| CDX68733 | Canola | nucleus | 31.45 | 26.6 |
| CDY43742 | Canola | mitochondrion | 20.13 | 26.02 |
| CDX72302 | Canola | nucleus | 32.08 | 24.4 |
| Zm00001d045039_P001 | Maize | nucleus | 35.85 | 24.15 |
Protein Annotations
| EnsemblPlants:CDY12336 | EnsemblPlantsGene:GSBRNA2T00061473001 | GO:A0A078FGI2 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | ProteinID:CDY12336 | ProteinID:CDY12336.1 |
| UniParc:UPI000253E59D | UniProt:A0A078FGI2 | MapMan:35.1 | : | : | : |
Description
BnaA06g20080DBnaA06g20080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGI2]
Coordinates
chrLK032020:-:496186..498064
Molecular Weight (calculated)
17797.9 Da
IEP (calculated)
4.383
GRAVY (calculated)
-0.491
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNAGKLT GIKQIVRLKE ILQKWQSVTI GSKSDDTELG ARKHTAIISP VINQRLLDMK TCDSDEETSQ SPEPPSDVPE GYLAVYVGPE LRRFIIPTNF
101: LSHSLFKVLL EKAEEEYGFD HSGALTIPCE VETFKYLLNC IENHPKDDTS AGDTVETEE
101: LSHSLFKVLL EKAEEEYGFD HSGALTIPCE VETFKYLLNC IENHPKDDTS AGDTVETEE
001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
Arabidopsis Description
Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.