Factsheet for Solyc07g042470.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035330	Potato	cytosol	82.27	97.09
VIT_11s0016g00520.t01	Wine grape	cytosol	54.19	67.48
Solyc12g009280.1.1	Tomato	nucleus	59.11	67.04
KRH19368	Soybean	cytosol	47.78	61.78
KRH37551	Soybean	cytosol	50.74	61.68
GSMUA_Achr6P31030_001	Banana	cytosol, mitochondrion	45.32	59.74
Solyc05g025920.2.1	Tomato	nucleus	57.64	59.09
GSMUA_Achr7P19840_001	Banana	cytosol	44.83	59.09
AT3G43120.1	Thale cress	cytosol	46.31	58.75
GSMUA_Achr5P22090_001	Banana	cytosol	44.34	58.44
CDY45067	Canola	cytosol	47.29	58.18
Bra020127.1-P	Field mustard	cytosol	47.29	58.18
CDY12336	Canola	cytosol	45.32	57.86
Bra034954.1-P	Field mustard	cytosol	45.32	57.86
CDY16564	Canola	cytosol	47.29	57.83
CDX92434	Canola	cytosol	47.29	57.83
Bra002330.1-P	Field mustard	cytosol	46.8	57.23
CDX88840	Canola	cytosol	47.78	57.06
CDX70944	Canola	cytosol	47.29	56.47
AT5G20810.2	Thale cress	cytosol	49.75	53.16
KRH04133	Soybean	cytosol	27.59	51.85
KRH12612	Soybean	mitochondrion	26.6	51.43
Bra006576.1-P	Field mustard	cytosol	47.78	45.12
HORVU5Hr1G062580.1	Barley	cytosol	37.93	44.51
Os09t0437400-00	Rice	cytosol	41.38	44.21
Zm00001d005803_P001	Maize	cytosol, mitochondrion, nucleus	37.44	41.99
Zm00001d020606_P001	Maize	cytosol	38.92	40.93
TraesCS5B01G212500.1	Wheat	cytosol	36.95	40.54
TraesCS5D01G222500.1	Wheat	cytosol	36.95	40.54
TraesCS5A01G211300.1	Wheat	cytosol	36.95	40.32
KRH02563	Soybean	cytosol	53.69	38.93
HORVU7Hr1G033320.1	Barley	cytosol	14.29	35.8
Solyc07g014620.1.1	Tomato	mitochondrion	24.63	33.33
Solyc10g083320.1.1	Tomato	mitochondrion	20.69	32.81
Solyc05g046320.1.1	Tomato	plastid	27.59	32.56
EER96781	Sorghum	cytosol	38.92	32.38
HORVU7Hr1G033340.1	Barley	cytosol	26.11	31.93
TraesCS7D01G160000.1	Wheat	cytosol	24.14	31.01
TraesCS7A01G159100.1	Wheat	cytosol	24.14	31.01
TraesCS7B01G063600.1	Wheat	cytosol	24.14	29.88
Solyc03g124020.1.1	Tomato	nucleus	27.09	29.26
Solyc09g009980.1.1	Tomato	mitochondrion	19.7	27.03
Zm00001d045039_P001	Maize	nucleus	27.09	23.31

Protein Annotations

EnsemblPlants:Solyc07g042470.2.1	EnsemblPlantsGene:Solyc07g042470.2	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF22	PFAM:PF02519	SEG:seg	UniParc:UPI000276BFF1	UniProt:K4CEA8
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:55663297..55666625

Molecular Weight (calculated)

22397.5 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.477

Length

203 amino acids

Sequence
(BLAST)

001: MDEHGGGGSK VTGIRQIVRL KELLHKWQNV TLSPKGTNSC HEHDQHPLQS SNIDSSSGNF HGGISPAITK RLKNSINVYC DSDDESCQSP EPPHGVPKGY
101: LGVYVGPELR RFIIPTTYLS DPLFKVLLEK VEEEFGFDHT GGLTIPCEIE TFKYLLQCME SHQRGVDPQH DSSGSSLAIK GGSRFNMGTT KSAYLEVGLI
201: ELW

Best Arabidopsis Sequence Match ( AT5G20810.1 )
(BLAST)

001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.